Gene Csal_2836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2836 
Symbol 
ID4028522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3165753 
End bp3166661 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content62% 
IMG OID637968044 
Productprotein translocase subunit secF 
Protein accessionYP_574881 
Protein GI92114953 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0341] Preprotein translocase subunit SecF 
TIGRFAM ID[TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACAGT TAGATTTCAT GGGCAAACGC CGCATAGCCT TCATCGTCTC CGTGCTGATC 
ACGGTGATTG CCGTCGGCGC GCTGGCGTTC AAGGGGCTCA ATCTGGGCCT GGATTTCACC
GGGGGCACCC TGGTGGAGGT CCGCTATCAG CAGGCACCGG AGCTGGACGA GTTGCGTGGT
CAGCTGGAAA GCGCCGGATT CGAGGACGTT CAGGTCCAGA CCTTCGGCGC CACCAACGAC
ATTCTGGTGC GTCTCCAGCA GACCTTCGAC AACGAGGTCG GCCAGCAGGT CGTCGATATC
CTGAACACCG ATGCCAACCA GGTGCAGTTG GTCCGCGCCG AGTTCGTCGG CGCCCAGGTC
GGCGACCAGC TCCGCGATCA GAGCGGGCTG GGCATGCTGC TGGCGCTCGC GGTGGTGATG
GTATACGTCG CCTTCCGTTT CCAGTACAAG TTCGCCTTCG GCGCCCTGGT CGCACTGGGG
CACGACGTGG TGATCGTGCT GGGGATCTTC GCGCTGCTGG GGCTCGACTT CGACCTCACG
GTACTCGCTG CCGTCCTGGC GGTGATCGGT TACTCGCTCA ACGACACCAT CATCGTCTAC
GACCGCATCC GCGAGAACAT CCGTCGGTCG CAGATCGATG ACATGCCCCA GATCTTCAAC
GAGGCGATCA ACCAGACGCT GGCGCGTACC ATGGCCACCT CGGGGACGAC ATTGCTGGTC
TTGCTGGCCT TGTTCTTCCT CGGCGGCGAC ATGATCCACA ACTTCTCGAT CGCCTTGATC
CTGGGCATCG TGGCGGGGAC CTTCTCGTCG GTCTACGTGT CCGCTGCCTT GCTGCTCGTG
GTCAAGCTGG AGCGCAAGGA CTTGATCCCG GCCCAGAAGG AAGACGACGA GGAAGAGGAA
CTGCCCTAG
 
Protein sequence
MRQLDFMGKR RIAFIVSVLI TVIAVGALAF KGLNLGLDFT GGTLVEVRYQ QAPELDELRG 
QLESAGFEDV QVQTFGATND ILVRLQQTFD NEVGQQVVDI LNTDANQVQL VRAEFVGAQV
GDQLRDQSGL GMLLALAVVM VYVAFRFQYK FAFGALVALG HDVVIVLGIF ALLGLDFDLT
VLAAVLAVIG YSLNDTIIVY DRIRENIRRS QIDDMPQIFN EAINQTLART MATSGTTLLV
LLALFFLGGD MIHNFSIALI LGIVAGTFSS VYVSAALLLV VKLERKDLIP AQKEDDEEEE
LP