Gene Csal_2830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2830 
Symbol 
ID4028515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3157335 
End bp3158096 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content62% 
IMG OID637968037 
Productdiguanylate phosphodiesterase 
Protein accessionYP_574875 
Protein GI92114947 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.011956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCATT GCGCGCGCAC CGACCATCAC TGCAAGCGTT GCGACCATCC CTTGCCCTTC 
GCTTTCAGCA TGGCCTTTCA GCCCATCGTC GATGTCGCCA GGCAACAGGT CATCACCCAC
GAGGCCCTGG TCCGCGGTCT CGGTGACGAA TCGGCCTACG GCGTGCTCTC CCAGGTATCC
GACAACCTGC TCTATCGCTT CGACCAGGCC TGTCGCGTCA AGGCCATCGA GCTGGCCAGC
GGGCTGGACA TGAAAAGCGA TTTGTCGATC AACTTCCTGC CCAATGCCGT CTACGCCCCC
GAAGCCTGCA TCCAGGCCAC GCTGGACGTC TCCCGACGCG TGGGGTGGCC CACCGAACGC
CTGGTCTTCG AAATCACCGA AACCGAGAGC GTGAACGATC GCGGGCACCT GCGCAGCATC
ATCGACACCT ACCGGCAGAT GGGATTCACC ACCGCCCTGG ACGACTTCGG CAAGGGTCAT
GCCAACCTCG ACCTGCTCGC CGACCTGCGC CCCGACAAGC TCAAGATCGA TCGCGCACTG
GTCATGGGCT GTCATCAGGA CACACGCCGC CAGATATTGC TCAAGGCGGT CGCCGATATT
GCCACGCAAC TGGAGATCGA CCTCGTGGCC GAAGGCATCG AATGCCGGGA GGAAGCCAAG
TGGCTGCATG AAGAAGCCGG CATCGTGCAG CATCAGGGCT TCTATTACGC GCGCCCGGCG
TTCGAATCCA TGCCCACCGT CGCGGGATTC GCCACACCAT AA
 
Protein sequence
MTHCARTDHH CKRCDHPLPF AFSMAFQPIV DVARQQVITH EALVRGLGDE SAYGVLSQVS 
DNLLYRFDQA CRVKAIELAS GLDMKSDLSI NFLPNAVYAP EACIQATLDV SRRVGWPTER
LVFEITETES VNDRGHLRSI IDTYRQMGFT TALDDFGKGH ANLDLLADLR PDKLKIDRAL
VMGCHQDTRR QILLKAVADI ATQLEIDLVA EGIECREEAK WLHEEAGIVQ HQGFYYARPA
FESMPTVAGF ATP