Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_2830 |
Symbol | |
ID | 4028515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 3157335 |
End bp | 3158096 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637968037 |
Product | diguanylate phosphodiesterase |
Protein accession | YP_574875 |
Protein GI | 92114947 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.011956 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCATT GCGCGCGCAC CGACCATCAC TGCAAGCGTT GCGACCATCC CTTGCCCTTC GCTTTCAGCA TGGCCTTTCA GCCCATCGTC GATGTCGCCA GGCAACAGGT CATCACCCAC GAGGCCCTGG TCCGCGGTCT CGGTGACGAA TCGGCCTACG GCGTGCTCTC CCAGGTATCC GACAACCTGC TCTATCGCTT CGACCAGGCC TGTCGCGTCA AGGCCATCGA GCTGGCCAGC GGGCTGGACA TGAAAAGCGA TTTGTCGATC AACTTCCTGC CCAATGCCGT CTACGCCCCC GAAGCCTGCA TCCAGGCCAC GCTGGACGTC TCCCGACGCG TGGGGTGGCC CACCGAACGC CTGGTCTTCG AAATCACCGA AACCGAGAGC GTGAACGATC GCGGGCACCT GCGCAGCATC ATCGACACCT ACCGGCAGAT GGGATTCACC ACCGCCCTGG ACGACTTCGG CAAGGGTCAT GCCAACCTCG ACCTGCTCGC CGACCTGCGC CCCGACAAGC TCAAGATCGA TCGCGCACTG GTCATGGGCT GTCATCAGGA CACACGCCGC CAGATATTGC TCAAGGCGGT CGCCGATATT GCCACGCAAC TGGAGATCGA CCTCGTGGCC GAAGGCATCG AATGCCGGGA GGAAGCCAAG TGGCTGCATG AAGAAGCCGG CATCGTGCAG CATCAGGGCT TCTATTACGC GCGCCCGGCG TTCGAATCCA TGCCCACCGT CGCGGGATTC GCCACACCAT AA
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Protein sequence | MTHCARTDHH CKRCDHPLPF AFSMAFQPIV DVARQQVITH EALVRGLGDE SAYGVLSQVS DNLLYRFDQA CRVKAIELAS GLDMKSDLSI NFLPNAVYAP EACIQATLDV SRRVGWPTER LVFEITETES VNDRGHLRSI IDTYRQMGFT TALDDFGKGH ANLDLLADLR PDKLKIDRAL VMGCHQDTRR QILLKAVADI ATQLEIDLVA EGIECREEAK WLHEEAGIVQ HQGFYYARPA FESMPTVAGF ATP
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