Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_2793 |
Symbol | |
ID | 4028932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 3123166 |
End bp | 3123933 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637968000 |
Product | extracellular solute-binding protein |
Protein accession | YP_574838 |
Protein GI | 92114910 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TGCTGACCAT GACCCTTCTC GGCAGCGCGC TGCTGGCCGG TAGTGCCTTT GCCCAGGACA CCTTGCGCAT CGGTGTCGAC GTGCCGTACG AGCCCATGGA ATACCGTACT GCCGATGGCG AACTCACGGG TTTCGACATC GAGCTGGGCA ATGCGCTTTG TGCCGAGATC GGGGCACAGT GCGAATGGGT CGTGCAGGCG TGGGATGGCA TCATTCCCGG CCTGATGGCA CGCAAGTACG ACGCGATCAT GTCGTCGATG ACCATCAACG AGGAGCGTAA GCAGACCGTT CTCTTCTCCG ATCCGTACTT CACGCCGCCC TCCGCCTGGT TCACGCCCAG CGACAGCGAG ATCGACTTCC CCGCCAAGCA GACGCTCGAA GGCAAGACCA TCGGGGTTCA GCGCGGCACG TTGCAGGACA ACTACGCCAC CGACATGTTC GGCGACGTGG CCGATATCAG CCGCTACACC ACGGCGGACG ATCTCGTGCT CGACATGGAT GCCGGTCGTG TCGATATCGC CTTCCTCGAC TTCCCGGTGG GCAAGTCCAC GCTGCTGGAC AGCGATGAAG GGAGCTACAA GGTCGTCGGT GAAATGATCA CCGAGCCCAA GAAGTACTTC GGTGACGGCT TCGGGATTGC CTTCCGCAAG CGCGATCAGG AACTCGCGGA CAAGTTCAAC GAGGCCCTGG CCACCCTGAA GGAAAACGGT ACCTATCAGG AGCTCTACAA CAAGTATTTC GCGGAAAACG GCAAGTAA
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Protein sequence | MKKLLTMTLL GSALLAGSAF AQDTLRIGVD VPYEPMEYRT ADGELTGFDI ELGNALCAEI GAQCEWVVQA WDGIIPGLMA RKYDAIMSSM TINEERKQTV LFSDPYFTPP SAWFTPSDSE IDFPAKQTLE GKTIGVQRGT LQDNYATDMF GDVADISRYT TADDLVLDMD AGRVDIAFLD FPVGKSTLLD SDEGSYKVVG EMITEPKKYF GDGFGIAFRK RDQELADKFN EALATLKENG TYQELYNKYF AENGK
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