Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_2783 |
Symbol | |
ID | 4028922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 3115236 |
End bp | 3115967 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637967991 |
Product | amino acid ABC transporter permease |
Protein accession | YP_574829 |
Protein GI | 92114901 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACAAC TGAACGCCTG GTTCACCGAA CTGCTCGCGG ACAACGCCAT CTTCACGGCC AACACCCTGG GGTATTACCT CGACGGGCTG GGCAATACCG TGCGGCTGGT CTTCTTGTCC CTCGTCATCG GCCTGCTGCT GGCCGTGCCG CTCGCCATTG CCCGCGGCTC GCGCCGCAAG TGGATCAAAT GGCCGGTGTT CTTCTACACC TACGTGTTTC GCGGCACGCC GCTGCTGATT CAGCTATACA TGATCTATTA CGGCGTGGTG TTCATCGAGG GTATTCAGGA CACCATTCTG TGGGTGGTGC TCAAGGATGC CTTCTTCCCC GCACTGATCG CCTTCACGCT CAATACCGCC GCCTATACCA CCGAGATCTT TCATGGCGCG ATCAAGGCCA CCTCGCGCGG CGAGATCGAG GCTGCAAGGG CATACGGCAT GTCGCGCGGG CTCATGATGC GCCGCATCAT CCTGCCCAGC GCCTTTCGTC GCGCCCTGCC CGCCTACGGC AACGAGGTGA TCTTCATGCT CCATGCCAGC GCCATCGCCA GCGTGGTGAC GATCATGGAC CTCACGGGGG CCGCCCGCTT CGTCTATGCC CGCTTCTACG CGCCCTTCGA CGCCTTCCTG TTCGTGGCGG CGATCTACCT GTGCTTGACC TTCGCCATCC TGTATCTCTT CCGCTACCTG GAAAAGAAAC TCCTGGCGCA CCTCAAGCCG ATCAACGGTT GA
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Protein sequence | MEQLNAWFTE LLADNAIFTA NTLGYYLDGL GNTVRLVFLS LVIGLLLAVP LAIARGSRRK WIKWPVFFYT YVFRGTPLLI QLYMIYYGVV FIEGIQDTIL WVVLKDAFFP ALIAFTLNTA AYTTEIFHGA IKATSRGEIE AARAYGMSRG LMMRRIILPS AFRRALPAYG NEVIFMLHAS AIASVVTIMD LTGAARFVYA RFYAPFDAFL FVAAIYLCLT FAILYLFRYL EKKLLAHLKP ING
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