Gene Csal_2783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2783 
Symbol 
ID4028922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3115236 
End bp3115967 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content61% 
IMG OID637967991 
Productamino acid ABC transporter permease 
Protein accessionYP_574829 
Protein GI92114901 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4160] ABC-type arginine/histidine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAAC TGAACGCCTG GTTCACCGAA CTGCTCGCGG ACAACGCCAT CTTCACGGCC 
AACACCCTGG GGTATTACCT CGACGGGCTG GGCAATACCG TGCGGCTGGT CTTCTTGTCC
CTCGTCATCG GCCTGCTGCT GGCCGTGCCG CTCGCCATTG CCCGCGGCTC GCGCCGCAAG
TGGATCAAAT GGCCGGTGTT CTTCTACACC TACGTGTTTC GCGGCACGCC GCTGCTGATT
CAGCTATACA TGATCTATTA CGGCGTGGTG TTCATCGAGG GTATTCAGGA CACCATTCTG
TGGGTGGTGC TCAAGGATGC CTTCTTCCCC GCACTGATCG CCTTCACGCT CAATACCGCC
GCCTATACCA CCGAGATCTT TCATGGCGCG ATCAAGGCCA CCTCGCGCGG CGAGATCGAG
GCTGCAAGGG CATACGGCAT GTCGCGCGGG CTCATGATGC GCCGCATCAT CCTGCCCAGC
GCCTTTCGTC GCGCCCTGCC CGCCTACGGC AACGAGGTGA TCTTCATGCT CCATGCCAGC
GCCATCGCCA GCGTGGTGAC GATCATGGAC CTCACGGGGG CCGCCCGCTT CGTCTATGCC
CGCTTCTACG CGCCCTTCGA CGCCTTCCTG TTCGTGGCGG CGATCTACCT GTGCTTGACC
TTCGCCATCC TGTATCTCTT CCGCTACCTG GAAAAGAAAC TCCTGGCGCA CCTCAAGCCG
ATCAACGGTT GA
 
Protein sequence
MEQLNAWFTE LLADNAIFTA NTLGYYLDGL GNTVRLVFLS LVIGLLLAVP LAIARGSRRK 
WIKWPVFFYT YVFRGTPLLI QLYMIYYGVV FIEGIQDTIL WVVLKDAFFP ALIAFTLNTA
AYTTEIFHGA IKATSRGEIE AARAYGMSRG LMMRRIILPS AFRRALPAYG NEVIFMLHAS
AIASVVTIMD LTGAARFVYA RFYAPFDAFL FVAAIYLCLT FAILYLFRYL EKKLLAHLKP
ING