| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2670 |
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| Symbol | |
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| ID | 4028452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | - |
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| Start bp | 2990185 |
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| End bp | 2992782 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637967878 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_574716 |
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| Protein GI | 92114788 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
[TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGACG ATAAGTCGAC GGCACCCTCG CGTGACGCCG AGCTGGAGGC GCTGACCGCC
AACGAGACCG GATCGCGTCA CCCGAGCGGT CCGGTGGGCA AGTTGCTGCT CTGCGTAGCG
GCGCTCTGGT CGCTATTTCA GTTATGGATC GCCTCGCCCC TGCCTTTCGT GTTCGGGTTC
GGGATCTTCA GTGCCACCGA GGCACGTTCC ATTCACCTGG CGTTTGCCAT CTTCCTGGCC
TTCATGGCCT ATCCGGCCCT GAAGCGTTCC CCGCGCGATC GCGTGCCGCT GCTGGATTGG
GGGCTGGCAC TGGTGGGCGC TTTCGCCGCG TCTTACATGT ATGTCTTCTA CGAGCAGCTG
GCGCAGCGTC CCGGTGCGCC GATCCTGCAA GACGTCATCA TCGGGGTGAT CGGCCTGCTC
CTGCTGCTGG AGGCGACCCG CCGCGCGCTG GGGCCGCCGC TGATGATCGT GGCCCTGGTC
TTCATCGTCT ATTCGCTGGC CGGCCCTTAC ATGCCGGGAA TGCTGGCGCA CCGTGGCGTC
AGTCTCTATG GACTGGTCAA TCACCAGTGG CTGACCTCGC AAGGCGTCTT CGGCATCGCC
CTGGGCGTGT CGACCAGTTT CGTGTTCCTG TTCGTGCTGT TCGGTGCCCT GCTGGACAAG
GCCGGCGCCG GCAACTATTT CATCAAGGTC GCCTTTTCGA TGCTGGGGCA CTACCGTGGC
GGCCCCGCCA AGGCGGCGGT CGTCGCCTCG GGCATGACGG GGCTCATCTC GGGCTCCTCG
ATCGCCAATA CCGTGACCAC CGGTACCTTT ACCATTCCCA TGATGAAGCG CGTCGGGTTC
TCGCCGACCA AGGCCGGCGC GGTCGAAGTG TCTTCCTCGG TCAATGGCCA GATCATGCCG
CCGGTCATGG GGGCCGCGGC CTTCCTGATG GTCGAGTACG TGGGCATTCC CTATGTCGAG
GTCATCAAGC ATGCCTTTCT GCCGGCGGTC ATTTCGTACA TCGCGCTGAT CTACATCGTG
CACCTCGAAG CGCTCAAGGC GAACATGAAG GGGCTGCAAA GCAGCAACCC GGTGCGTCCT
TTCCTGCAGA AGGCGGTAGG GTTCTTGACC GGGCTGATCG GCATCATGGT GCTGGCGCTG
GTCGTCTATT ACGGTCTGGG CTGGCTCAAG CCGGTGCTCG GCGAGGCCAT GCCCTGGGTG
GCGGCGATAG GCCTGGCTGT GGTCTACGTG GGCTTGCTCA AGGTGGGGTC GCGCTACCCC
GAGCTCGCCC ACGACGATGC CAACAGCGAA ATGACCGAGC TGCCGCAGAC GCGGCCCACG
GTGATGGTGG GGCTGTACTT CCTGTTGCCC GTCGTGGTGC TGGTGTGGTG CTTGATGGTG
GAACGTCTGT CGCCGGGCCT CTCGGCGTTC TGGGCGACGG TGTTCATGAT CGTGATCATC
CTGACCCAGC GTCCGCTGGA AGCGTTCTTC CGGGGACGCG GGGGCCTGGG CCAGGAGGTC
AAGCGTGGCT GCATCGATCT CTGGGAAGGG CTGATCGACG GCGCGCGCAA CATGATCGGC
ATCGGTATCG CCACGGCGGC GGCGGGGATC ATCGTCGGTG CCGTCTCGCA GACCGGTGTG
GGGCTGGTGC TCGCGGATCT GGTCGAAACG CTGTCGATGG GCAATCTGCT GTTGATGCTG
CTGCTCACCG GGGTGCTGAG CCTGATCCTG GGCATGGGAC TGCCGACCAC GGCCAACTAC
ATCGTGGTCT CCGCGCTGCT GGCACCGGTC ATCGTGCAGC TGGGGCAGCA GAACGGCTTG
ATCGTGCCGT TGATCGCGGT GCACCTGTTC GTGTTCTATT TCGGCATCAT GGCCGACGTG
ACGCCGCCAG TGGGGCTGGC GTCGTTCGCC GCCGCGGCGA TCTCCGGGGC CGACCCGATT
CGTACCGGTT TCCAGGCGTT CTACTACAGT CTGCGTACCG CGGCCTTGCC GTTCTTGTTC
ATCTTCAACA CCGATCTGCT GCTGATCGAC GTGAATCTCT GGCATGGCCT GCTCATTTTC
GTGGTCGCCA CGGTGGCGAT GTTGATCTTC GCCGCCGCGA CGCAGGGCTA CATGCTGGTG
AAGAGCCGCT GGTACGAGAG CCTGTTGCTC CTGCTGGTGG CGTTTACCCT GTTCCGCCCG
GGATTCTGGA TGGATACGAT TCACGATCCG TATCGCGATA TCCCGCCCGC GCAGTTCGAG
CAGGCGCTGG GTGCCATCGA CGATGACAGC AACCTGCGTG TCAGAATCGA CGGCCTCGAT
GCCTACGGTG CGCCGACCAG TTTCGTGATC CTGGTGCCGG CGCCGGATGG TGATACGGGT
GCCGAGCGCA TGCAGAACCT GGGGCTGACG CTGATGCAGC AGGATGGCAA GACGCTGGTC
GACATGACCG AGTTCGGCAG CCAGGCGGAG AAGCTGGGCT TCGACTTCGA TCAGGAAATC
GTCGCCATCC GTGCGCCAGT GGAACGCTGG CCGAAAGAGT GGATGTGGAT ACCCGGACTG
GCGGTCTTCG CCCTCGTGGT CTGGCTGCAG CGTCGGCGGC GTCAGGCGCC CGATGCGCGA
GCCGATGCGG TGACCTGA
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| Protein sequence | MQDDKSTAPS RDAELEALTA NETGSRHPSG PVGKLLLCVA ALWSLFQLWI ASPLPFVFGF
GIFSATEARS IHLAFAIFLA FMAYPALKRS PRDRVPLLDW GLALVGAFAA SYMYVFYEQL
AQRPGAPILQ DVIIGVIGLL LLLEATRRAL GPPLMIVALV FIVYSLAGPY MPGMLAHRGV
SLYGLVNHQW LTSQGVFGIA LGVSTSFVFL FVLFGALLDK AGAGNYFIKV AFSMLGHYRG
GPAKAAVVAS GMTGLISGSS IANTVTTGTF TIPMMKRVGF SPTKAGAVEV SSSVNGQIMP
PVMGAAAFLM VEYVGIPYVE VIKHAFLPAV ISYIALIYIV HLEALKANMK GLQSSNPVRP
FLQKAVGFLT GLIGIMVLAL VVYYGLGWLK PVLGEAMPWV AAIGLAVVYV GLLKVGSRYP
ELAHDDANSE MTELPQTRPT VMVGLYFLLP VVVLVWCLMV ERLSPGLSAF WATVFMIVII
LTQRPLEAFF RGRGGLGQEV KRGCIDLWEG LIDGARNMIG IGIATAAAGI IVGAVSQTGV
GLVLADLVET LSMGNLLLML LLTGVLSLIL GMGLPTTANY IVVSALLAPV IVQLGQQNGL
IVPLIAVHLF VFYFGIMADV TPPVGLASFA AAAISGADPI RTGFQAFYYS LRTAALPFLF
IFNTDLLLID VNLWHGLLIF VVATVAMLIF AAATQGYMLV KSRWYESLLL LLVAFTLFRP
GFWMDTIHDP YRDIPPAQFE QALGAIDDDS NLRVRIDGLD AYGAPTSFVI LVPAPDGDTG
AERMQNLGLT LMQQDGKTLV DMTEFGSQAE KLGFDFDQEI VAIRAPVERW PKEWMWIPGL
AVFALVVWLQ RRRRQAPDAR ADAVT
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