| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2645 |
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| Symbol | |
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| ID | 4028173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 2955810 |
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| End bp | 2957864 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637967853 |
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| Product | choline transport protein BetT |
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| Protein accession | YP_574691 |
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| Protein GI | 92114763 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00290709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCTAC AACACACCGA CGACGTCAGT CGCGATCGCC TCAATCCGGC GGTCTTCTTC
AGTTCGGCGA TCGGCATCGT GCTCTTCGCG CTATGGACGA TGTTCTTCAC CGACTCGGCC
AGTGGCGTGA TCAATGCCGT GCTGGGATGG ATCTCCGACT CTTTCGGCTG GTACTACTTT
CTGGCCGTGG TCGCCTACCT GGTCTTCGTG ATCGCCATCG GCCTATCACG CTTCGGCAAG
ATCAAGCTGG GACCGGATCA TTCCACGCCC GATTTCAACA TGGCCTCATG GGCGGCCATG
CTCTTCTCGG CGGGCATCGG CATCGACCTG CTGTTCTTCT GCATCGCGGA GCCGGTATCG
CAGTTCCTGG CGCCGCCTCA GGGAGACGGC AACACGGTGG AAGCCGCACG TCACGCCATG
CAGTTGACGT TCCTGCACTG GGGGCTTTCC GGCTGGGGCA TCTACACCCT GGTGGGGATG
TCGCTGGCGT TCTTCAGCTA TCGGCACAAT CTGCCGCTGA CCATCCGCAG CGCACTCTAT
CCGATCTTCG GCAAGAAGAT TCACGGTCCC ATCGGCCATA CCGTGGATAC CGCCGCCGTT
CTGGGCACGG TATTCGGCAT CGCCACCAGC CTGGGGATCG GCGTCATCCA GCTCAATTTC
GGTCTCAACT ACATGTTCTC GATTCCCGAG AACACCCTGG TGCAGGCCGC ACTGGTGATC
ATGATCGTGT TCTTCGCCAC CGTCTCCGCC GTCACCGGGG TCGAGAAGGG CATCCGCCGC
CTTTCCGAGT TCAACATGCT GTTGGCGCTG TTGTTGCTGC TGTTCGTGCT CTTCAGCGGC
AAGACCCTGT TTCTGCTCAA CGCGCTGGTG CTCAACGTCG GCGACTATTT CTCCGACTTC
ATCAGCCTGT CGATGAATAC CTACGCCTTC GATCCGCCCA CCGCCTGGCT CAATGGCTGG
ACGATCTTCT TCTGGGCCTG GTGGATTGCC TGGGGGCCGT TCGTGGGACT CTTCCTGGCG
CGCATCTCCC GCGGCCGCAC CATTCGTGAA TTCGTCGCCG GCACGCTGAT GCTGCCGCTG
GTCTTCATGA TGGCGTGGAT GTCGATCATG GGGAACAGCG CCATCGACAT GGTCATGAAC
GGCGCGGCGG ACTTCGGCGA TGCGGCGATG AACACGCCGG CCTCCTCCAT TTACCTGTTC
CTCGAGTCAC TGCCGTGGAC CGGGCTGACG ACCATCGTCA CCACCATTCT GGCCATCGTG
TTCTTCGTGA CCTCCGGCGA CTCCGGGGCG CTGGTACTCT CCAACTTCAC GTCCAGGCTC
AAGGACGTGA ACAGCGACGC ACCGATCTGG ATGCGCATCC TCTGGGCCTG CGTGATCGGC
CTGCTCACCC TGGCGCTATT GATGGCCGGC GGCTTGTCGG CACTGCAGAG CGTGGTGGTC
ATCACCGGGC TGCCGTTCTC CATCGTGCTG TTCTTCATGA TGGCGGGGCT GTTCAAGGCC
CTGCGAGTGG AAGGCTTCAA GGAAGACAGT CACCGCGCGA GCCTGGCCGG CCACCTTTCC
AGCCGCACCG GCGCGGCAGA ACGTACGCCA CGTGGCTGGC GTCAGCGCCT GGGCCGTGCC
ATGAGCTTCC CGGGCAGCAA GCAGGCACGC CGCTTCCTCG ATGAGGTAGG CAAACCGGCC
ATGCAGGACG TCAGTCAGGC GTTGAGCCAA CAGGGCGTCG AGGTCGAGGT CGTCGAAGAA
GACGGCGACG ACCCGCATCT GGCTCTCAAC GTCGGTCTCG GCGACGAGCA GAACTTCACC
TATCAGATCT GGCCACGCCG GTTCGCGACC CCCTCGTTCG CACTGCGCGC CCAGCAGGCC
AATGCCTATT ACTATCGCCT GGAGGTCTAC CTTCTCGAAG GCAGCCAGGG GTATGACCTG
ATGGGCTACA GCAAGGAACA GGTCATCGAG GACATTCTCG ATCAGTACGA ACGTCACCTG
CACTTCCTGC ACATGAACCG GGAAGCACCA GGCAACGTGA CCATGCCGGA CAGCCCCGAA
CAACCGCCGG CATGA
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| Protein sequence | MPLQHTDDVS RDRLNPAVFF SSAIGIVLFA LWTMFFTDSA SGVINAVLGW ISDSFGWYYF
LAVVAYLVFV IAIGLSRFGK IKLGPDHSTP DFNMASWAAM LFSAGIGIDL LFFCIAEPVS
QFLAPPQGDG NTVEAARHAM QLTFLHWGLS GWGIYTLVGM SLAFFSYRHN LPLTIRSALY
PIFGKKIHGP IGHTVDTAAV LGTVFGIATS LGIGVIQLNF GLNYMFSIPE NTLVQAALVI
MIVFFATVSA VTGVEKGIRR LSEFNMLLAL LLLLFVLFSG KTLFLLNALV LNVGDYFSDF
ISLSMNTYAF DPPTAWLNGW TIFFWAWWIA WGPFVGLFLA RISRGRTIRE FVAGTLMLPL
VFMMAWMSIM GNSAIDMVMN GAADFGDAAM NTPASSIYLF LESLPWTGLT TIVTTILAIV
FFVTSGDSGA LVLSNFTSRL KDVNSDAPIW MRILWACVIG LLTLALLMAG GLSALQSVVV
ITGLPFSIVL FFMMAGLFKA LRVEGFKEDS HRASLAGHLS SRTGAAERTP RGWRQRLGRA
MSFPGSKQAR RFLDEVGKPA MQDVSQALSQ QGVEVEVVEE DGDDPHLALN VGLGDEQNFT
YQIWPRRFAT PSFALRAQQA NAYYYRLEVY LLEGSQGYDL MGYSKEQVIE DILDQYERHL
HFLHMNREAP GNVTMPDSPE QPPA
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