| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2561 |
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| Symbol | |
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| ID | 4026142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 2872485 |
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| End bp | 2874995 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637967768 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_574607 |
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| Protein GI | 92114679 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTCCAC ACACCTTGCC GCCGTCACTG ACCGAGCTGC TGGAAGTCCC TGGCATCGCC
CTCACGATTG CCGATGGCGA CCTGCCCGGC TGTCCGCTGG TGTTCGCCAA TAAAGGGTTC
GAACAGCTGA CAGGCTATAC GCGCGAGGAA GTGCTGGGAC GCTCATGCCG CCTGCTGCAG
ACGGTCGACC TCGCCCCCGA GGCGAGTCAT TGCCTGCGTC GCGCCATCGA ACACCGCACT
CCGGTGACGA TGACCCATGA AAACCGTCGC AAGGATGGCT CGCGATACGA TAACGAGCTC
ACGTTGGCAC CCTTGTACAG CCGCGACGGT CACTGCTACC TGGTCGGCGT GCAGCGCGAT
GTCAGCCAAC GGCTGCGCCC GCGAACGCGC TGGCGACACC AGAGCCGCCT GCTCGATCGA
CTCAACGCCC AGGTGCCCGG TGTGCTGTTC CACTACCGGC AGGCCCCCGA CGGTCGCGGT
GACTTCCCTC ACGTCAGTGA ACGCCTGGCC GATTACTGCG GCCTCGAGCG TATGGCATTG
ACGCACGACG CCGAATGCTT CTTCTCCCGG ATCGAGGACG ACGATCGCAC GCGACTGCGT
GTCTCGCTGA CATCCTCCGC CACCTCGCTG CGGTTATGCC AGGTCGTCTT TCGCTATCAT
CATCCCACTC GCGGGCTACG CTGGCTGGAA TGCTCCGCCG TGCCCACCCG CTTGTCCAAC
GGCGGCACGC TGTGGCATGG CTACACGACC GACGTCACTG CACGCAAGCT CGCCACGGAG
CGCATGGCGC TGGCCGAAAC GGTCTTCGAC AGCACCCACG ACGGCATTCT CGTGACCGAT
GCCGACAAGC GCATCATCGA CGTCAATCCC GCTTTCACGA AGCTCACCGG CTACAGTGCC
GACGAAGCCC TGGGACGCAA GCCGCACCTG CTGTCCTCGG GCAAGCACGA TGCGAACTTC
TACCACAACC TGTTCGCCAC GGTGCATCAG CAAGGCTACT GGACAGGCGA TATCTGGAAT
GTGCGCAAGG ATGGCCGCCA GTTGATCGAA AACGCCACCA TTTCGGCGAT CCACGATGCC
GACGGCACCA TCACGCACTA TATCGCCGTC TTTCGCGACA TCACCCAAAA GCACCTGAAG
CAGGCGCGCC TGGAACGACG CGCGATCTAC GACCCGCTCA CGGGCCTGTT CAATCGCGAA
CACTTCGGCG ATGCACTGGA AAATCTGCTC TCCGGGCTTT CCTACACCGG CATCGGAATC
GCCGTCCTGT TCATCGACCT CGACGACTTC AAGCCGGTCA ATGACACCTA TGGCCATGCC
GCCGGCGATG ACGCCCTCGT GACCATCGCC CAACGGCTCA AGCAACAGAC GCGCAGCACC
GACCTGGTCG CCCGTCTGGG CGGCGACGAA TTCGTCATCG CACTGGCAGG CATGCGCAGC
GCGGAAAAGG CCGAAAAGGT CGCCTTCAAG ATTCTCGATG ATCTGATCAG CCCCATCGCG
CTGCGCGGCG AACATGCCAT CACGCTTTCC GCCTCGGTGG GCATCGCCTA TACCGACGAC
AGCCGCTTTG CCCCGGACGC CCTGATCGCC GCCGCCGACA GCGCGATGTA CGAAGCCAAG
AGTCGTGGCA AGAATCAGGT CGCCATCACC GAGCATCAGC AAGCCAACGG CGACGATCTC
TACACCCGAC TACAGACCGC GCTGGACGAC GGTGAGCTGG CCCTTTTCTA TCAGCCGATT
CTCTCGTTGA ATGACGAACG CATCGTCAGC TTCGAGGCCC TGGTGCGCTG GTACCACCCC
GAGCAGGGCT TGCTCGCGCC GCACCATTTC ATCGATATCG TCAATCATTC GTCGCTGGAG
CGGGTCTATA GTGCCTGGCT GGTCAACCAG GCCGCGCATA CCGTACAGCG CTTTCAGGCA
CGCGACATGG CGGTGACCGT CAGCATCAAC GTGACGCGCG ACCAGGTCGA ATCCGGCCAG
CTCGCCGACG ACATGGCACA GGCTCGCGAA CGTCACGCCC TCGCTTCGCC CTTTCTCAAC
GTGGAAGTGG TGGAAACCGC CCAGTTCCAC GACATCGACC TGGCGTACAA CCAGCTTCAG
CATGCCCGTC GACTCGGCGC GCAAATCGCC CTCGACGACT TCGGCTCCGG CGTATCCTCG
CTGACATATG CCAGCCAGCT CCCCATCGAC ATCGTGAAGA TCGACCAGGC GGTGATTCGC
CACCTCGCCG AGCGTCCCCA GCAACGCCGC TACGTCAGCG GCATCATCGA CATGGCCCAC
GCCATGCAGC GCGTCGTCCT GGCCGAAGGC GTCGAAAGCG TCGAACAGCT GGATGTACTG
CGGCAGCTGG GCTGCGACAT GGTACAGGGC TTTCTCATCG GCCATCCCCT GCCCAGCCAG
GAACTCGAAG CTCACTATCT CGCCGAGGAC GCAGAGCCGC TCTATCCGCT GGCGCTTCTC
GCAGAGTCCA GGCAAAACGT GGGTTTATCC CAGGCGCCCG GGCGCTTATA A
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| Protein sequence | MAPHTLPPSL TELLEVPGIA LTIADGDLPG CPLVFANKGF EQLTGYTREE VLGRSCRLLQ
TVDLAPEASH CLRRAIEHRT PVTMTHENRR KDGSRYDNEL TLAPLYSRDG HCYLVGVQRD
VSQRLRPRTR WRHQSRLLDR LNAQVPGVLF HYRQAPDGRG DFPHVSERLA DYCGLERMAL
THDAECFFSR IEDDDRTRLR VSLTSSATSL RLCQVVFRYH HPTRGLRWLE CSAVPTRLSN
GGTLWHGYTT DVTARKLATE RMALAETVFD STHDGILVTD ADKRIIDVNP AFTKLTGYSA
DEALGRKPHL LSSGKHDANF YHNLFATVHQ QGYWTGDIWN VRKDGRQLIE NATISAIHDA
DGTITHYIAV FRDITQKHLK QARLERRAIY DPLTGLFNRE HFGDALENLL SGLSYTGIGI
AVLFIDLDDF KPVNDTYGHA AGDDALVTIA QRLKQQTRST DLVARLGGDE FVIALAGMRS
AEKAEKVAFK ILDDLISPIA LRGEHAITLS ASVGIAYTDD SRFAPDALIA AADSAMYEAK
SRGKNQVAIT EHQQANGDDL YTRLQTALDD GELALFYQPI LSLNDERIVS FEALVRWYHP
EQGLLAPHHF IDIVNHSSLE RVYSAWLVNQ AAHTVQRFQA RDMAVTVSIN VTRDQVESGQ
LADDMAQARE RHALASPFLN VEVVETAQFH DIDLAYNQLQ HARRLGAQIA LDDFGSGVSS
LTYASQLPID IVKIDQAVIR HLAERPQQRR YVSGIIDMAH AMQRVVLAEG VESVEQLDVL
RQLGCDMVQG FLIGHPLPSQ ELEAHYLAED AEPLYPLALL AESRQNVGLS QAPGRL
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