| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2535 |
|---|
| Symbol | |
|---|
| ID | 4026116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 2840814 |
|---|
| End bp | 2842529 |
|---|
| Gene Length | 1716 bp |
|---|
| Protein Length | 571 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637967742 |
|---|
| Product | 2-isopropylmalate synthase |
|---|
| Protein accession | YP_574581 |
|---|
| Protein GI | 92114653 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCTCC AGGACCCTTC CACCAAATAT CGCCCCTTCG AGGCCGTCGA CCTGCCCGAC
CGTCAATGGC CGGCGCAGCG GATAACGCAT CCGCCCGTGT GGTGCAGCGT GGACATGCGC
GACGGCAACC AGGCGCTGAT CGACCCCATG GACCTCGAAC GCAAGCGGCG GTTTTTCGAC
CTGCTGGTCA AGACCGGCTT CAAGCAGATC GAGGTCGGTT TTCCCTCGGC CTCGCAGATC
GACTTCGATT ACGTGCGCGA GCTGATCGAG GACGATGCGA TCCCCGACGA CGTGACCATC
CAGGTGCTGA CCCAGGCGCG GCCGCATCTC ATCGAGCGCA CCTTCGAAGC GCTGGAAGGC
GTCAAGCGCG CCATCGTGCA TGTCTACAAC GCCACCGATC CGGTGTTTCG GCGCGTGGTG
TTCGGCGTCG ACAAGGCCGA ATGCATCAAG ATCGCCACCG ACGCCACGAC ACAGATCAAG
GACATGATGG CGGCACGCCC GAATACCGAC TGGACCTTTC AGTACTCGCC GGAACTCTTC
ACGTCGACCG AGCTGGATTT CGCCGTGGAT ATCGTCGATG CCGTCAGCGA GGTCTATGCA
CCGACACCGG CCAAGCCGAT GATCGTCAAC CTGCCGGCGA CGGTGGAGAT CGCCACGCCC
AACCATTATG CCGACCAGAT CGAGTGGTTC TGCCGTCATG TGGCGCGGCG CGACAGCCTG
GTGGTGAGCG TCCATCCCCA CAACGACCGC GGCACCGGGG TGGCGGCGGC GGAGCTGGCG
TTGATGGCCG GCGCCGACCG TGTGGAAGGC ACGCTGTTCG GCAACGGCGA ACGTACCGGC
AACGTGGATA TCGTCACCCT GGCGATGAAC ATGTATACCC AGGGCGTGCA TCCGCAGCTC
GACTTTTCCA ACATCACGCC GCTGATGCGC GAGGTGGAGC ACTGCAACCA GTTGCCGGTG
CATCCTCGCC ACCCGTATGT CGGTGACCTG GTGTTCACGG CGTTCTCGGG CTCGCATCAG
GATGCCATCA AGAAGGGCAT GGCCGAGCGC CGCGACAATC CCGACAGCCT TTGGGGCGTG
CCGTATCTGC CCATCGACCC GCTCGACGTG GGGCGTTCCT ACGAGGCGGT GATCCGCGTC
AACAGCCAGT CGGGCAAGGG CGGGGTGTCC TACCTGCTGG AGCAGGAGCA CGGCATCGAG
TTGCCGCGTC GTCTGTCCAT CGAGTTCAGC CAGGTGGTGC AGACGGTGGC CGAGCGTACC
GGGCGCGAGA TCACCTCCCA GATGATCTAT CGCACCTTCG AGGATGAATA CCTCACCAGC
CGCGACCCCT ATGCGCTGAT CAATCATCGC CTGAGCTCGG ACGACGATAG CCCGCGCGTA
CGCCTCGACG CCCAGATCGA CGAGCAGGGC GAGCGCCGCC ATGTCACCGG CGAGGGCAAC
GGTCCGCTGG CCGCCTTCAT CAAGGCGCTG GCGGCACATG GACTGGACGT CGAGATCATC
GATTATCACG AGCACTCGCG CGGCCAGGGG GCGGATGCCG AGGCGGTGGC CTATGTCGAG
GTGCGTGTCG AGCAGACGCC GGTGTTCGGG GTCGGTGTCG ACGAGAGCAT CACCAGCGCC
TCCATGAAGG CGGTACTCGG CGCGCTGAAT CGCCACTGGC GTACTCAGCA GGCGCCGGCG
CCCAACGTCA CCGCCGAGAC GCTCGGCGAG GCCTGA
|
|---|
| Protein sequence | MMLQDPSTKY RPFEAVDLPD RQWPAQRITH PPVWCSVDMR DGNQALIDPM DLERKRRFFD
LLVKTGFKQI EVGFPSASQI DFDYVRELIE DDAIPDDVTI QVLTQARPHL IERTFEALEG
VKRAIVHVYN ATDPVFRRVV FGVDKAECIK IATDATTQIK DMMAARPNTD WTFQYSPELF
TSTELDFAVD IVDAVSEVYA PTPAKPMIVN LPATVEIATP NHYADQIEWF CRHVARRDSL
VVSVHPHNDR GTGVAAAELA LMAGADRVEG TLFGNGERTG NVDIVTLAMN MYTQGVHPQL
DFSNITPLMR EVEHCNQLPV HPRHPYVGDL VFTAFSGSHQ DAIKKGMAER RDNPDSLWGV
PYLPIDPLDV GRSYEAVIRV NSQSGKGGVS YLLEQEHGIE LPRRLSIEFS QVVQTVAERT
GREITSQMIY RTFEDEYLTS RDPYALINHR LSSDDDSPRV RLDAQIDEQG ERRHVTGEGN
GPLAAFIKAL AAHGLDVEII DYHEHSRGQG ADAEAVAYVE VRVEQTPVFG VGVDESITSA
SMKAVLGALN RHWRTQQAPA PNVTAETLGE A
|
|---|
| |