| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2486 |
|---|
| Symbol | |
|---|
| ID | 4026624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 2793703 |
|---|
| End bp | 2794971 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637967693 |
|---|
| Product | mandelate racemase/muconate lactonizing enzyme |
|---|
| Protein accession | YP_574532 |
|---|
| Protein GI | 92114604 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTGCA TTTCATCGGT CGTCGTCACT CCGATTGCCT TTCGTGATCC GCCCCTGCTC
AATGTGAGTG GTGTTCATGA ACCCTGGGCC CTGCGCTCGA TTATCGAGGT CACAATCGAA
GACGGTCGCT ATGGTCTCTC CGAGTCTTAT GGGGATGAGC AGACGCTGTC ACAGCTGCAG
ACGGTGGCTT CCCATCTAGT GGGCGTCGAT GTCTTCCATC TTAACGAGCT GAAGTCCATC
GTCGAAGCAT CGGTTTCCCA CAAGTCTCAA GAGAACGGAA TCGAACTGGC GCCGGGGACC
AACCAGGCAA CCACGGTGCC ACGCATTTTC GCTGCCTTCG AGGTTGCCTT TCTCGATCTG
ATGGGCAAGA TCACCGAGCG CAGCGTCTGC GACTTGTTGG GAGGCAAGGT GCGCGATGCC
GTCCCCTACA GTGCCTACTT GTTCTACAAG TACGGTCACC ATCAGTTCAG CCAGGACGAC
TGGGTCGATG CCTGGGGCGA AGTGCTGACC CCTGAGGACA TCGTGCGCTC GGCCAGGCAG
ATGATCGACC AATACGGCTT CCAGTCGATC AAACTCAAGG GCGGAGTGTT TGAGCCCGAG
CAGGAGCTGT TGGCGGTCCG TGCCTTGCGC GAGGCTTTTC CTGAATATCC ACTGCGCATC
GACCCTAATG GTGGCTGGAC GCCCGAGACC ACCAGGCGCC TGCTTCCACA GATGGAGGGG
GTGCTGCAGT ACCTCGAGGA TCCGGCCTCC GGCAAAGACA GCATGGCCGA GGTCCACCGG
TCGGCCACCA TGCCACTGGC CACCAATATG TGCGTGATCG GTTTCTTCGA TTTCCCCGAA
GCGATCGCCA AGCAGTCCGT GGATGTGATC CTCTCCGATC ACCACTACTG GGGCGGATTG
CAGGCGACCC GAGAACTGGC CCGTGTCTGC GAGACCTGGG GGCTGGGGTT GTCCATGCAT
TCCAACTCGC ATCTTGGCAT CAGCCTGATG GCAATGACCC ACGCCGCCGC GGCGATCGAC
AACCTGACCT ATGCCTGTGA CACCCATTAT CCCTGGCAGG AGGAAGAAGT GATTGTGGGC
GGAAAGGTTT CTTTCGAGGA GGGCAGTGTG CGTGTGCCAG ATGCGCCCGG GTTGGGGGTT
GAACTGGATC GCGACGCCTT GCAAAAACTG GCGCGCAACT TTCAGGAGTG TGGCATTCGT
TCGCGCAACG ATGTGAAGGA AATGCAGAAA TATGACCCCA GCTGGACGGG GAAAGTACCT
CGTTTCTGA
|
|---|
| Protein sequence | MSCISSVVVT PIAFRDPPLL NVSGVHEPWA LRSIIEVTIE DGRYGLSESY GDEQTLSQLQ
TVASHLVGVD VFHLNELKSI VEASVSHKSQ ENGIELAPGT NQATTVPRIF AAFEVAFLDL
MGKITERSVC DLLGGKVRDA VPYSAYLFYK YGHHQFSQDD WVDAWGEVLT PEDIVRSARQ
MIDQYGFQSI KLKGGVFEPE QELLAVRALR EAFPEYPLRI DPNGGWTPET TRRLLPQMEG
VLQYLEDPAS GKDSMAEVHR SATMPLATNM CVIGFFDFPE AIAKQSVDVI LSDHHYWGGL
QATRELARVC ETWGLGLSMH SNSHLGISLM AMTHAAAAID NLTYACDTHY PWQEEEVIVG
GKVSFEEGSV RVPDAPGLGV ELDRDALQKL ARNFQECGIR SRNDVKEMQK YDPSWTGKVP
RF
|
|---|
| |