| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2485 |
|---|
| Symbol | |
|---|
| ID | 4026623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 2792565 |
|---|
| End bp | 2793647 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637967692 |
|---|
| Product | TRAP dicarboxylate transporter- DctP subunit |
|---|
| Protein accession | YP_574531 |
|---|
| Protein GI | 92114603 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0992841 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATTC GCACTTTGGC TCATTCTCTC ACTCTGGCAA GCGTCGCACT GGCGTTTTCC
GGTACTGTCC AGGCTTCAGA CGAGCTGAAG GTCCAGACCT CCTTCAACTC GGGGGACTTC
GCCTATCAAT ACCTGCAGGA AAATTGGGTG CCCAAACTCA AGGAAGCGAC AGGAGGTGAT
GTCACTATCA CCCTAATGCC AACCGGCAGT GTGGTCCCCT ACAAGGAAAC CATGGAGGCC
GTCGCCATGG GGTTACTTGA TGGTGATATG ACTGCTCCAG CTTATTTTAC TGGAAAGGAT
CCTGTTTTTG CCTTGATGGG TGACCTGATC GCCGGCTATG ACAAGCCTTC GCAGTTCCTC
GACTTCTGCC AGAAAGGTGG AGGAGAAGAG GTTCTGCAGA AGGCCATCGA TGCCCAGGTT
GGCGACAAGA TTAAAGTGGT TGGCTGTGGC CCCTACAAGC GTGAGGCCCT GGTAGCTGCG
GTGCCGATCC GCAGCGTCGA AGACCTCGAG GGCGTGAAGA TCCGTTCGCC GGAAGGCCTG
GCGGCGGCGG TATTCGAACG TGCCGGAGCA ACACCAGTCA ATATTCCTTT TTCTGAGGTT
TACACCTCGC TTCAGCAGGG CGTGGTCGAT GCGGCCGATG CCTCAGCTTA TGTCAATAAT
GACGCCTCAG GCCTTCACGA TATTGCCAAG TACCCGATCT ATCCGGGTAT TCATAGCATG
TCGTCTCAGC AGTTCACGCT TAACCAGGAG GTTTGGGAAT CGCTGGACGA TGAGGACCGG
CGGGCCTTGC ATCAGTGGTT CTACGATGCA TTCAACGACT TGGCCGGTGC GGTGCAGGAG
CAGGATGAAA AACTAGTAGC CCGTGACAAG AAGAAGGATG ACATGACTGT CATCGATTGG
CCTCAAGAAG AGCGTGACCA GTTTCGCAAG ATTGCTCGGG GGGCCTGGGA GGCTTTCGGA
GAGAAGAGCG AACTGGCACA GCAGGCATTA CAAGCCCACC TCGAGTATAT GCACGAAACC
GGTCTACTCG AGGGTAGTGA TGTGAAGGCA ACCGACAAGG CAGATCAGAA CGAGCAGAAC
TGA
|
|---|
| Protein sequence | MQIRTLAHSL TLASVALAFS GTVQASDELK VQTSFNSGDF AYQYLQENWV PKLKEATGGD
VTITLMPTGS VVPYKETMEA VAMGLLDGDM TAPAYFTGKD PVFALMGDLI AGYDKPSQFL
DFCQKGGGEE VLQKAIDAQV GDKIKVVGCG PYKREALVAA VPIRSVEDLE GVKIRSPEGL
AAAVFERAGA TPVNIPFSEV YTSLQQGVVD AADASAYVNN DASGLHDIAK YPIYPGIHSM
SSQQFTLNQE VWESLDDEDR RALHQWFYDA FNDLAGAVQE QDEKLVARDK KKDDMTVIDW
PQEERDQFRK IARGAWEAFG EKSELAQQAL QAHLEYMHET GLLEGSDVKA TDKADQNEQN
|
|---|
| |