Gene Csal_2484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2484 
Symbol 
ID4026622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand- 
Start bp2791986 
End bp2792498 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content52% 
IMG OID637967691 
ProductTRAP-type mannitol/chloroaromatic compound transport system small permease component-like protein 
Protein accessionYP_574530 
Protein GI92114602 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0291342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTAC TCAGCCGGTT GGCGGCAGGC ATGGACCGAA TCAGTGCCTT CATTGGCTAT 
GCCTGTGCTG TGTTGTTCTT TGCTTGCATA ATACTTTCTG CTCTTGAAGT GGTCATGCGT 
TATGTCTTCA ACTCGCCCAC CCAGTGGACC TTCGAGACAG TCATGGCGCT GTGTGCCACC 
GGCTGGGTGA TGACCAGTGG TTACGTGACA CAGCGGAAAC GACACATTGC CATCACCATG 
ATGGAACTCG TGGTGCCTGC CCATGTTTGG AAAAAGATGG AACTGGTTTC GCTTGGAGTA 
GCAATTTTTG CTCTGGCGAT GCTGATCTGG GCCACATGGG AGCCAGCAAT GATGGCGCTA 
CACGGTAGTG AACGTAGCGG TAGTTCATTC AACCCGTTAT TACCGGCTTA TCTCAAGCCA 
ACCCTGGTAG TGGGTGCTTT TCTTTATCTC CTGCAGCTGC TCGCCAATGT AGTTCACTGG 
TTCGAGGATC AGGCCAAGGG AGAGGCCGAA TAA
 
Protein sequence
MRLLSRLAAG MDRISAFIGY ACAVLFFACI ILSALEVVMR YVFNSPTQWT FETVMALCAT 
GWVMTSGYVT QRKRHIAITM MELVVPAHVW KKMELVSLGV AIFALAMLIW ATWEPAMMAL 
HGSERSGSSF NPLLPAYLKP TLVVGAFLYL LQLLANVVHW FEDQAKGEAE