Gene Csal_2478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2478 
Symbol 
ID4026616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand- 
Start bp2785140 
End bp2785673 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content55% 
IMG OID637967685 
Producttripartite ATP-independent periplasmic transporter DctQ 
Protein accessionYP_574524 
Protein GI92114596 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCTCAT TCTCCGAGAA AATGAATGAC CAGAGCCCCG CTTCGGCATC GCGAACAGCA 
TTCGATGGCT TTCTGGACGG CATTGCCCAA CTTTGCATCA TCGTGTCGGG TATCTTGCTG 
GTTTTCTTGA TTGCGACGTT TGGCTGGTTG GTCTTCGGCC GTTACGTGCT CAATGACACG 
CCGACATGGG TGGAACAGTC CTCGCTCCTG ATCGTCGTCT ATATCACCTG TCTAGGGGCT 
GCCGCCGGTG TGAGAAACAA TACCCACCTT AGCATCGACT TCGTGCGTGA AGGGCTGCCG 
TATTTGCCAC GCGAGATCAT GCGCTATATC GCTGACCTTT TCGTCACGTG TTTCGGTCTC 
TTCATGGCCT GGCAAGGGTG GCACCTGGTC CTGGAGAACC TGGAGCGTCC CATTCCAATG 
ATCGGATTTT CCGAAAGCTG GCGTGCGGCA CCATTGGTGA TCTGTGGCGT GCTGATGGTT 
CTGTTCTCTT GCACCAATAT CGCCAAGCGC CTGCTCAAGT CACGGAAGGG GTGA
 
Protein sequence
MSSFSEKMND QSPASASRTA FDGFLDGIAQ LCIIVSGILL VFLIATFGWL VFGRYVLNDT 
PTWVEQSSLL IVVYITCLGA AAGVRNNTHL SIDFVREGLP YLPREIMRYI ADLFVTCFGL 
FMAWQGWHLV LENLERPIPM IGFSESWRAA PLVICGVLMV LFSCTNIAKR LLKSRKG