| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2463 |
|---|
| Symbol | |
|---|
| ID | 4026601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 2770140 |
|---|
| End bp | 2771993 |
|---|
| Gene Length | 1854 bp |
|---|
| Protein Length | 617 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637967670 |
|---|
| Product | Poly(R)-hydroxyalkanoic acid synthase, class I |
|---|
| Protein accession | YP_574509 |
|---|
| Protein GI | 92114581 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
|---|
| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.728384 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCAAG GGCCTGAGGA GGGCGATGGC GCCTTCAGTG ACCCGCACGC CTGGCAGCGC
CAGGTGACTG CCTTCAACGA GCAATATCAA GCCCTCATGC AGGAGGCCTT CAATCGTCTG
TGGCCCAGCG AGGCAGGTGC CTCGGTCTAC GCCGACATTC AGGAGACCCT GCGTATCGGG
GCGGATGCCA TGATCGTCAA CGCCCCGGCG GTCTACACCG TGCAGATGCG TCTGGCCCAG
GATCAGTGGC GAGTGTGGCA GAATGCCTTG CGCGAGATCA TGGGGGAGAC GGTGACGCCG
GTGATCGAAC CGCGCCCCGA TGATCGCCGC TTTCGCGACG ACGCCTGGCA TTCCCATCCT
TTCTACCGCT TCATTCTCCA GCATTACCTG TTGTTCGTGC GTGCCATCGA GGAACTGCTC
GTCAGCCTCG ACAGTTTGCC CCCACGCGTG CGGCATCAGC TGGAATTCTA TGCACGGCAA
TACGTCAATG CGCTGGCGCC GAGCAATTTC GTGTCCACCA ACCCCGAGGT GGTACGCAAG
ACGCTCGAGA CGCGAGGGCA GAATCTCGTC GAGGGACTCA GGCGGCTGCG CGAGGACCTG
GACAACTCCG CCGAAGGACT CAATGTCGCG ATGACCGATC GCAGCGCCTT TCGGCTGGGT
GACAACATCG CCATCACGCC TGGAGACGTG GTCTTCGAAA ACGACGTGAT GCAGTTGATC
CAGTACCATC CGACCACCGA CAAGGTCTTC AAGACACCGC TGCTGATCGT GCCGCCCTGG
ATCAACAAGT ACTACATCCT CGACTTGCGG TCGGACAACT CGATGGTGAA GTGGCTGGTA
GAGCAAGGGC ATACCGTCTT CATGATCTCC TGGCGCAATC CCGGGCCGGA GCAGCGTCAC
CTGACCTGGG CCGACTACAT GCAGTCGGGG CCGATCGCCG CCATGGCGGC GATCGAGCAA
GCCTGCGGCG AGAAGTCCGT CAACTTGCTG AGCTACTGCA TCGGCGGCAC GCTGGCGGCG
ACCACGGTCG CCTATCTGAC CAGCACCCGA CGTGGCCGCA AGGTCCGCTC GGTGACCTAT
ATGGCGACCT TGCTGGACTT CAGCGATCCC GGCGAAATCG GCGTGTTCCT CAGTGAGCCG
GTACTGGCCG GCATCGAGCG TCAACTGGCG CGTGACGGTT ATCTCGATGG CCGGGTCATG
GCCTTTTCCT TCAACTTGCT GCGCGAGAAC GATCTCTTCT GGTCGTTCTA CATCAGCAAT
TATCTCAAGG GCGAGACGCC GCCGGCCTTC GACCTGTTGT ACTGGAACAG CGATGGCACC
AACCTGCCGG CGGGCACGCA CGGCTGGTAT CTCCGTCACA TGTACCGGGA AAATCGTCTC
ATCGAGCCCG GCGGCATCGA GCTGGACGGC GTCAGGATCG ATCTGCGCAA GGTGTCGACC
CCGAGCTATT TCGTGGCCAC GCGTGACGAC CATATCGCCA AGTGGCGGAC CTGCTATCTC
GGTGCGCGCC TGCCCAAGGG ACCACGCACC TTCGTGCTGG GAGGCGCCGG GCACATCGCC
GGCATCGTCA ATGCGCCGAC GCGCCAGAAA TACGGGTACT GGACGCGTGA CGAGATGCCC
GACGACCCGG ATGCCTGGTT CGAGGACACC GAGTATCGCG AAGGCTCCTG GTGGCCGCAT
TGGCAAGCCT GGATGACCGA CAACCGCTAT GCCGATCCCG ACAAGACAGT GGCGGCGCGA
CATCCCGGTG ATGGCGAGTT GTCCCCCATC GAGCCCGCGC CGGGCCGCTA TGTACGGCAG
ACCATTCCCG ACGTGCTTTC CGGGACGGCC CCGGAAGATA GCGACTTGTC GTGA
|
|---|
| Protein sequence | MWQGPEEGDG AFSDPHAWQR QVTAFNEQYQ ALMQEAFNRL WPSEAGASVY ADIQETLRIG
ADAMIVNAPA VYTVQMRLAQ DQWRVWQNAL REIMGETVTP VIEPRPDDRR FRDDAWHSHP
FYRFILQHYL LFVRAIEELL VSLDSLPPRV RHQLEFYARQ YVNALAPSNF VSTNPEVVRK
TLETRGQNLV EGLRRLREDL DNSAEGLNVA MTDRSAFRLG DNIAITPGDV VFENDVMQLI
QYHPTTDKVF KTPLLIVPPW INKYYILDLR SDNSMVKWLV EQGHTVFMIS WRNPGPEQRH
LTWADYMQSG PIAAMAAIEQ ACGEKSVNLL SYCIGGTLAA TTVAYLTSTR RGRKVRSVTY
MATLLDFSDP GEIGVFLSEP VLAGIERQLA RDGYLDGRVM AFSFNLLREN DLFWSFYISN
YLKGETPPAF DLLYWNSDGT NLPAGTHGWY LRHMYRENRL IEPGGIELDG VRIDLRKVST
PSYFVATRDD HIAKWRTCYL GARLPKGPRT FVLGGAGHIA GIVNAPTRQK YGYWTRDEMP
DDPDAWFEDT EYREGSWWPH WQAWMTDNRY ADPDKTVAAR HPGDGELSPI EPAPGRYVRQ
TIPDVLSGTA PEDSDLS
|
|---|
| |