Gene Csal_2462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2462 
Symbol 
ID4026600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2769113 
End bp2770126 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content66% 
IMG OID637967669 
Producttranscriptional regulator 
Protein accessionYP_574508 
Protein GI92114580 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGACA CGCGACGTCC GACGCCCGGG CCGGAGCGCA TCGCGATCCT GCTGATGCCG 
CAGTTTTCCT TTGCCGGTCT GGGCGCGATT CTGGATCCGC TGTTCATCGT CAACTGGCTG
ACTCAGGAAT CGCGCTTCAA GTGGCAGTTG CTGGGCAGCG ATGCCACGGT CGCCGCCTCC
AACGGCGTCC CCCTGAACGT GGATACCGAG TGGCCGGCAC CGGCCGATCT GGACAGCGTG
TTCGTCCTCG CCAGTTTCGA GACCAAGACG TATACCGGCG ACAAGCGCAT CGCCATGTGG
CTGCGCCAGT GTGCGGCGGC CGGGGTGGCG TTGGGCGGCA TCGAGATGGG CAGCGAAGTA
CTGGCCGCGG CGGGCGTGCT CGACGAGCAT CAGGTGGCCG TGCACTGGGA TAATCTGGAA
GGCTTTCGCG AGCTTTATCC ACGCATCCAG GCCACCAGCG ACCTCTATCG CATCGCCGGC
CAGCGGCTGA GCTGCGCCGG TGGCACCGCC GTGCTCGACA TGATGTTCGC CTGGCTCACG
CCACGTGTGG AGCCGCCCTA CATGGAGGAA TTGCGCAATC ACTTGCTGGA ACGCCGCCAG
CGTCGCGACG ACAGCGAACA ATTGTCGGCG GCCCCCGAGC ACCATGTCGA GACGTCGGCG
CAGTTGCGCA AGGTGATTCG CACCATGCGC CGCACCCTGG AAACGCCGCT CTCGGCACCG
GCGCTGGCTG CCCTCGTCGG GCTCTCGCCG CGCCAGCTGG AGCGGCGCTT CAAGGCCGAA
CTCGGTGTCA CGCCGATTCG TTACTATCTC TGGCTGCGCA TCAATCGCGC GCATCGACTG
CTGCAGCAGA CCGACCTGAG CGTGGCAGAG GTCGCCAGTT GCGCCGGCTT CGGCTCCCTG
GAGCATTTCT CACGTGCCTA CCGGCGCTTC TTCGGCTGCG CCCCCAGCGA CGACCGCCTG
CAATCGCGAG ACGCCCCGGT GGTCCCGGTG CGACTCTTCC CGATCAAGCG CTGA
 
Protein sequence
MIDTRRPTPG PERIAILLMP QFSFAGLGAI LDPLFIVNWL TQESRFKWQL LGSDATVAAS 
NGVPLNVDTE WPAPADLDSV FVLASFETKT YTGDKRIAMW LRQCAAAGVA LGGIEMGSEV
LAAAGVLDEH QVAVHWDNLE GFRELYPRIQ ATSDLYRIAG QRLSCAGGTA VLDMMFAWLT
PRVEPPYMEE LRNHLLERRQ RRDDSEQLSA APEHHVETSA QLRKVIRTMR RTLETPLSAP
ALAALVGLSP RQLERRFKAE LGVTPIRYYL WLRINRAHRL LQQTDLSVAE VASCAGFGSL
EHFSRAYRRF FGCAPSDDRL QSRDAPVVPV RLFPIKR