Gene Csal_2457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2457 
Symbol 
ID4026595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand+ 
Start bp2763180 
End bp2764139 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content67% 
IMG OID637967664 
Productsubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_574503 
Protein GI92114575 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components 
TIGRFAM ID[TIGR03414] choline ABC transporter, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0936294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCTA CCCCCCGACA CCGCACCCCA CTGGGCCGCT TGACGTCCAC GTTGCTCGGC 
GGCGCCATGG GCGCGCTGCT GCTCGCGCCT TTCGGGCTCG CCCAGGCCGA GGACGACATG 
GTCCGCTTCG GCACGCCGCA ATGGCCCGGC GCCACCGTCA AGTCGGAAGT GGCGCGACAA 
CTGCTGGACA CGCTCGGCTA TCGCACCTCG CTGCGGGAAG CCAGCTCGTC GATCATCCTG 
GAAGGCATGG CGAGCGGCGA TCTCGACGTC AACATGGCGC TCTGGCGGCC GTCGCAAAGC 
GGCATGCTCG AGCCCCGCCT GGCGGCCGGC GAGCTGGTCG AAGTCGTCAA GAACATCGAC 
GGCGCGCGCT TTCAGCTCGC GGTGCCCGAA TACGTGTGGG ACGCCGGTGT GCACTCGATG 
GCCGATCTCG CCGAGCACGC GGAACGCTTC GGCCGCACCT TCTATGGCAT CGAGCCGGGC 
AATGTCGGCA ACGAATTGAT GCAGAACGCC ATCGACGACG GCACCTACGG CCTGGATGAC 
TGGCGAGTCG CCGCGTCCAG CGAGACCGGC ATGATGTCGC AGGTCGAAAG CGACATCCGC 
AACGAGCAAT GGGTCGCGTT CCTGGGCTGG GAACCGCACT GGATGAACGT CGACTTCGAC 
ATTCGCTACC TGGAGGACCC CGAGAACCTC TGGGGCGACG CCAGCTCGGT ATCCACGGTG 
GTCGCCAGCG ACTTCGCCGA GCGTCATCCC AACGTCATCG CCTTTCTCGA CAACATGGTC 
GTGCCCATCG CCGTCCAGGA CCAGTGGGTC TACGCCTACA GCCGCGAGGA CCAGCCGCTG 
GAAGCGGTCG CCGCGACCTG GATCCAGTCG CACCCCGAAC GGGTCAACGC CTGGCTCGAG 
GGCGTGACCA CCGCGGATGG CGAGACCCGC GCGCAAGACG CCTATCAGGC CTCGCGTTGA
 
Protein sequence
MTATPRHRTP LGRLTSTLLG GAMGALLLAP FGLAQAEDDM VRFGTPQWPG ATVKSEVARQ 
LLDTLGYRTS LREASSSIIL EGMASGDLDV NMALWRPSQS GMLEPRLAAG ELVEVVKNID 
GARFQLAVPE YVWDAGVHSM ADLAEHAERF GRTFYGIEPG NVGNELMQNA IDDGTYGLDD 
WRVAASSETG MMSQVESDIR NEQWVAFLGW EPHWMNVDFD IRYLEDPENL WGDASSVSTV 
VASDFAERHP NVIAFLDNMV VPIAVQDQWV YAYSREDQPL EAVAATWIQS HPERVNAWLE 
GVTTADGETR AQDAYQASR