Gene Csal_2453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2453 
Symbol 
ID4026591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2758409 
End bp2759872 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content67% 
IMG OID637967660 
Productisopropylmalate isomerase large subunit 
Protein accessionYP_574499 
Protein GI92114571 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0065] 3-isopropylmalate dehydratase large subunit 
TIGRFAM ID[TIGR00170] 3-isopropylmalate dehydratase, large subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.142412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGCC AGACTCTTTA CGACAAGCTC TGGTCGCGGC ACCTGGTAAA GGAACGCGAC 
GATGGCACGG CGTTGATCTA TATCGATCGT CACCTGCTCC ACGAGGTGAC CTCGCCGCAG
GCCTTCGAGG GTCTGCGGCT TGCCGGGCGC AAGCCGTGGC GGCTGGATAC CAATCTCGCC
ACGCCGGACC ATAATGTGCC GACCACGCTC AAGGAGCGTT CCGAGGGCAA TGCGGGCATC
GTCGATCCGG TCTCGCGCAT TCAGGTCGAG ACACTGGACG ACAACTGCGC GAGCTTCGGC
ATCGAGGAGT TCCGCATCAA CGATGCGCGT CAGGGCATCG TGCATGTGGT CGGGCCGGAG
CAAGGCGCCA CGCAGCCGGG CATGACGGTG GTCTGCGGCG ATTCGCACAC GGCCACGCAC
GGAGCCTTCG GGGCCCTGGC GCACGGCATT GGCACCTCCG AGGTCGAACA CGTGCTGGCG
ACCCAGTGCC TGATTCAGCG CAAGATGAAG AACATGCAGG TACGCGTCGA GGGCGAGCTG
GGGCTCGGCG TGACGGCGAA GGACATCGTG CTGGCGGTGA TCGGCAAGAT CGGCACCGCC
GGCGGCACCG GCTACGCCAT CGAGTTCGCC GGCAGCGCGA TTCGCGACCT GTCCATGGAA
GGGCGCATGA CCATCTGCAA CATGGCCATC GAGGCCGGCG CGCGCGTGGG GCTGGTCGCG
GTGGACGAGA CGACCATCGA ATACCTGCGT CGGCGCCCCT TCGCGCCCAG CGAAGAACAT
TGGGACGCGG CGGTCGCCGA CTGGCGCGAG CTGGTCTCCG ACGACGATGC GCCGTTCGAC
AAGGTGGTCG AACTCGACGC CGCCGAGATC GAGCCGCAGG TCACCTGGGG CACGAGCCCG
GAAATGGTCG CCGGTGTCGG CGCACAGGTA CCGGATCCCG CCGCCGCCGG CGACGAGACC
GTGCAGCGCG GCGTCTCGCG TGCCCTCGAG TACATGGGGC TCCAGGCGGG GCAGCGGATC
ACCGATATCC GCCTCGACAA GGTCTTCATC GGGTCGTGCA CCAACTCGCG CATCGAAGAC
CTGCGTGAAG CGGCCAGGGT CGCCGAGGGA CGCAAGGTGG CGGATTCCAT CAAGCTGGCG
ATGGTCGTGC CCGGTTCCGG ACTGGTCAAG CGCCAGGCCG AGGAGGAGGG GCTGGACAAG
ATCTTCCTCG AGGCAGGCTT CGAATGGCGC GAGCCTGGGT GTTCCATGTG CCTGGCGATG
AACGCCGACA AGCTGGGAAC CGGCGAGCAC TGCGCCTCGA CCTCCAACCG CAATTTCGAG
GGTCGCCAGG GGTACGGCGG GCGCACGCAT CTGGTGAGTC CCGCCATGGC CGCCGCCGCG
GCCATCGCCG GCCACTTCGT GGACGTGCGC GATTTCGGGG CCGGCCGGGC CGCCAACGAT
GACAGTCAGG TACAGGAGGC GTGA
 
Protein sequence
MAGQTLYDKL WSRHLVKERD DGTALIYIDR HLLHEVTSPQ AFEGLRLAGR KPWRLDTNLA 
TPDHNVPTTL KERSEGNAGI VDPVSRIQVE TLDDNCASFG IEEFRINDAR QGIVHVVGPE
QGATQPGMTV VCGDSHTATH GAFGALAHGI GTSEVEHVLA TQCLIQRKMK NMQVRVEGEL
GLGVTAKDIV LAVIGKIGTA GGTGYAIEFA GSAIRDLSME GRMTICNMAI EAGARVGLVA
VDETTIEYLR RRPFAPSEEH WDAAVADWRE LVSDDDAPFD KVVELDAAEI EPQVTWGTSP
EMVAGVGAQV PDPAAAGDET VQRGVSRALE YMGLQAGQRI TDIRLDKVFI GSCTNSRIED
LREAARVAEG RKVADSIKLA MVVPGSGLVK RQAEEEGLDK IFLEAGFEWR EPGCSMCLAM
NADKLGTGEH CASTSNRNFE GRQGYGGRTH LVSPAMAAAA AIAGHFVDVR DFGAGRAAND
DSQVQEA