Gene Csal_2452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2452 
Symbol 
ID4026972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2757759 
End bp2758406 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content62% 
IMG OID637967659 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_574498 
Protein GI92114570 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR00171] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.162518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACAGT TCGATCGTCA TCAGGGCCTC GTGGCGCCCA TGGACCGCGC CAACGTGGAT 
ACCGACCTGA TCATCCCCAA ACAGTTCTTG AAGTCGATCA AGCGCACCGG TTTCGGGCCC
AATCTGTTCG ATGAACTGCG CTACCTGGAC GAGGGCTACC CGGGTCAGGA CGTCGCCAAG
CGTCCGCTCA ATCCGGATTT CGTGCTCAAC CAGCCGCGTT ACCAGGGCGC CAGCGTGCTG
CTGGCACGTC GCAACTTCGG CTGCGGCAGC TCGCGCGAGC ATGCCCCCTG GGCACTGGAG
GACTTCGGGT TTCGCGTGAT CATCGCGCCG AGTTTCGCCG ATATCTTCTT CAACAATGCC
TTCAAGAACG GCCTGTTGTT GATCACGTTC GACGAGGCCA CGGTGGACCG GCTGTTCCAG
GAAGCCGAGG CCGAGGAAGG CTATCGTCTG GATGTCGATC TGGAAAAGCA GCAGGTCACC
ACGCCCAGCG GCGAAGTGCT GACCTTCGAG GTCGACCCCT TCCGCAAGCA TTGCCTGCTC
GAAGGGCTGG ACGATATCGG CCTGACCCTG AAGGACGCCG ACGCCATCGA GGACTTCGAG
GCACGGCATC GTCAGGCGCG GCCGTGGCTA TTCCGCCAGG CGGGCTGA
 
Protein sequence
MRQFDRHQGL VAPMDRANVD TDLIIPKQFL KSIKRTGFGP NLFDELRYLD EGYPGQDVAK 
RPLNPDFVLN QPRYQGASVL LARRNFGCGS SREHAPWALE DFGFRVIIAP SFADIFFNNA
FKNGLLLITF DEATVDRLFQ EAEAEEGYRL DVDLEKQQVT TPSGEVLTFE VDPFRKHCLL
EGLDDIGLTL KDADAIEDFE ARHRQARPWL FRQAG