Gene Csal_2420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2420 
Symbol 
ID4026940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand- 
Start bp2723104 
End bp2724231 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content63% 
IMG OID637967627 
Product2-methylcitrate synthase 
Protein accessionYP_574466 
Protein GI92114538 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01800] 2-methylcitrate synthase/citrate synthase II 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0822163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGACA AGACGCCCAG CAGTACCGGC CTGCGCGGCA TGAGCGCCGG CAGCACCGCG 
CTATGCACCG TGGGCAAGGA CGGTTCGGGA CTCACGTATC GCGGTTACGA TATCCACGAT 
CTCGCCGAGC ACGCCCGCTT CGAGGAAGTG GCATATCTGC TGCTCAAGGG CACATTGCCG 
ACTCAAGACG AGCTCGACGC CTATGTGGCG ACGCTCAAGA CGCTGCGTGG TCTCCCCGAT 
GCGCTCAAGA CGGTACTCGA GCAGCTGCCT GCCGATACGC ACCCGATGGA TGTGATGCGC 
ACCGGCTGCT CGGTACTCGG CAACCTCGAG ACCGAAGCGA GCTTCGGCGA GCAGCAGGCG 
CACTCCGATC GCATGCTCGC GGCGTTCCCG TCGATCATCA ATTACTGGTA TCGCTTCAGT 
CACGAGGGCG TACGCATCGA CACCGAGACC GATGACGACT CGGTAGGCGG GCATTTCCTG 
CACCTGTTGC ACGGCAAGCC GGCCTCGGAG CTGCATGCCC GGGCGATGAA CGTCTCGCTG 
ATCCTGTACG CCGAACATGA ATTCAATGCC TCGACGTTCA CGGCGCGTGT CTGTGCCTCG 
ACCCTGTCGG ACATCCATTC CTGCGTGACC GGCGCCATCG GCTCGTTGCG GGGGCCGTTG 
CACGGGGGGG CCAACGAGGC GGCGATGGAC ATGATCGAAA ACTGGCAGAC ACCGGAAGAA 
GCCGAGCACG AGATCCTCGG CATGCTTTCC CGCGGTGACA AGATCATGGG CTTCGGGCAC 
GCGATCTACC GCGAGTCCGA TCCGCGCAAC GCCATCATCA AGCAGTGGTC GAAGAAACTC 
GCCGAGGACG TGGGCGACAG CGTGCTCTAC CCGGTGTCCG AGCGTGTCGA GGCGGTCATG 
TGGCGCGAGA AGAAGCTGTT CTGCAATGCC GACTTCTTCC ACGCCAGTGC CTATCACTTC 
ATGGGAATTC CCACCAAGCT GTTCACGCCC ATCTTCGTGT GTTCGCGACT CACCGGCTGG 
TGTGCCCATG TCGCCGAGCA GCGCGGCAAC AATCGCATCA TTCGCCCCAG CGCGGATTAT 
GTGGGACCGG AGAAGCGCGA TTGGGTGCCG ATGGAGCAGC GCGGTTAA
 
Protein sequence
MADKTPSSTG LRGMSAGSTA LCTVGKDGSG LTYRGYDIHD LAEHARFEEV AYLLLKGTLP 
TQDELDAYVA TLKTLRGLPD ALKTVLEQLP ADTHPMDVMR TGCSVLGNLE TEASFGEQQA 
HSDRMLAAFP SIINYWYRFS HEGVRIDTET DDDSVGGHFL HLLHGKPASE LHARAMNVSL 
ILYAEHEFNA STFTARVCAS TLSDIHSCVT GAIGSLRGPL HGGANEAAMD MIENWQTPEE 
AEHEILGMLS RGDKIMGFGH AIYRESDPRN AIIKQWSKKL AEDVGDSVLY PVSERVEAVM 
WREKKLFCNA DFFHASAYHF MGIPTKLFTP IFVCSRLTGW CAHVAEQRGN NRIIRPSADY 
VGPEKRDWVP MEQRG