| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2419 |
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| Symbol | prpD |
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| ID | 4026939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | - |
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| Start bp | 2721566 |
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| End bp | 2723050 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637967626 |
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| Product | 2-methylcitrate dehydratase |
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| Protein accession | YP_574465 |
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| Protein GI | 92114537 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
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| TIGRFAM ID | [TIGR02330] 2-methylcitrate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00018845 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCA ACGTCGAACA GAATCAACGT CCCGATTACG ACATAGAACT GCAGCGGATC
GCCGATTACG TGCTGGAATA TCGCGTGGAG AGTCGCGAGG CTCTGGACAC TGCGCGCCAT
TGCCTGATGG ATACGCTGGG CTGCGGTTTG CTGGCACTGC GCTTCCCCGA GTGCACCAAG
CATCTCGGGC CACTGGTCGA AGGCACGGTG GTGCCGCATG GTGCCCGTGT GCCCGGTACC
TCGCTGCGCC TCGATCCGGT CAAGGCCGCA TGGGATATCG GTGCCATCAT TCGCTGGCTG
GATTACAACG ACACCTGGCT GGCGGCGGAA TGGGGGCACC CGTCGGACAA CCTGGGCGGC
ATTCTGGCGG TGGCGGATCA CTTGTCGCAA AAACGGGTGG CCGTGGGCGA GCCGGCGCTG
ACGATGCGTG ACGTGCTCGA CGCCATGGTC ATGGCGCACG AGATTCAGGG CGTGCTGGCC
CTGGAGAACT CCTTCAATCG CGTGGGGCTC GATCACGTGG TGCTGGTCAA GGTCGCCTCG
ACGGCCGTGG TCGCCAAGTT GATGGGCGCG GATCGCGAGC AGTTGCTGGC CGCGTTGTCG
CATGCGTTCG TCGATGGTCA GAGTCTGCGC ACCTATCGTC ATGCACCGAA TGCCGGATCA
CGCAAGTCAT GGGCGGCGGG AGACGCGACG TCGCGTGCCG TGCGTCTGGC GGATATCGCC
ATGCGTGGCG AAATGGGCAT CCCCGGTGTG CTCAGCGCTC CCCAGTGGGG CTTTTACGAC
GTGTCGTTCG CCAAGACTAA CAAGGATCAG CAGTTGAAGC CGGAGGCGGA GCGTCATTTC
CGTGTCTCGC AGGCGTACGG GTCCTATGTC ATGGAGAACG TCCTGTTCAA GATCAGCTTC
CCCGCGGAGT TCCATGCCCA GACCGCGTGC GAGGCGGCCG TTCTCCTGCA CCCTCAGGTC
AAGGATCGCC TGGACGACAT CGACCGCATC GTGATCACGA CGCACGAGTC GGCGATTCGC
ATCATCTCCA AGCACGGGCG TCTGGCCAAT CCGGCCGATC GTGACCACTG CCTGCAATAC
ATGACGGCCG TGCCCCTGGC GTTCGGACAC CTGCAGGCGG AGCACTACGA AGATGCCTTC
CACGAGGCAC ACCCGATCAT CGATCGGCTG CGCGACAAGA TGGAGGTCGT GGAGGACGAA
CGCTATACCC GTGAATATCT CGAGGCGGAC AAGCGCTCCA TCGCCAATGC GGTCCAGGTC
TTCTTCGTCG ATGGCAGCAG CACCGAACAG GTCGCCGTGG AGTATCCCAT CGGACATCGG
CGGCGCCGTG CAGAGGGCAT GCCGCTGCTG GAAGAAAAGT TTCAGGCAAA CCTCGCGACA
CGCTTTCCGG CGCGTCGCTG CGACGAGATT CTGGCGTTGT GCACGTCGCA GGAGCGCCTG
GAAAGCACGC CCGTCCATCG CTTCGTCGAT CATTTCGTGA TTTGA
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| Protein sequence | MSANVEQNQR PDYDIELQRI ADYVLEYRVE SREALDTARH CLMDTLGCGL LALRFPECTK
HLGPLVEGTV VPHGARVPGT SLRLDPVKAA WDIGAIIRWL DYNDTWLAAE WGHPSDNLGG
ILAVADHLSQ KRVAVGEPAL TMRDVLDAMV MAHEIQGVLA LENSFNRVGL DHVVLVKVAS
TAVVAKLMGA DREQLLAALS HAFVDGQSLR TYRHAPNAGS RKSWAAGDAT SRAVRLADIA
MRGEMGIPGV LSAPQWGFYD VSFAKTNKDQ QLKPEAERHF RVSQAYGSYV MENVLFKISF
PAEFHAQTAC EAAVLLHPQV KDRLDDIDRI VITTHESAIR IISKHGRLAN PADRDHCLQY
MTAVPLAFGH LQAEHYEDAF HEAHPIIDRL RDKMEVVEDE RYTREYLEAD KRSIANAVQV
FFVDGSSTEQ VAVEYPIGHR RRRAEGMPLL EEKFQANLAT RFPARRCDEI LALCTSQERL
ESTPVHRFVD HFVI
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