| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2409 |
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| Symbol | |
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| ID | 4026846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 2704021 |
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| End bp | 2706198 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637967611 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_574455 |
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| Protein GI | 92114527 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.275658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCAGA ATTCCCACTC TCGTCCCGAC GACCGTGACG AGACCGCTAT CGACGCCATC
GCCGAGGGCG CCGATGACAA TGCCGGCGAA CCCAACCGCC GTGCGTATAC CGGCTGGCAG
TGGTGGCTGT TCGGCATTCT CGCCATCGCG TACTCGAGCT TTCACCTGAT ATCCCTCAAC
GTCTACCCGC TGGAAACGTG GTCGTTTCGC ATCATCCACA TCTGCGGGGC CTTGATTCTC
GGCTATGGCC TCTACGCGGG CACCCGCTTC GCCGAGGAAG GCAAGCCGCG CTCGCCACGC
TGGATGGCGG CCCTGGGGTA TGCACTGTTG CTCCCCGCTC TGTACGCACT GGTGCAGGTC
GTCCTGATGC AGCAGGCCAT GAGTCAGGGC GCGATGCGTA TCGAACCGAA TATCGAAGCC
TTCCATTTCG GCTATCCGCT GATGTTGACC ACGGCGGCCG CCATTCTCCT GTCATGGAGC
GACCGGCAGT ACCAGCACCG CCTCTCGCCG GCCGATCTGG TGCTGATGGT ATGCGCGCTG
GCCAGCGCCG GTTATCTGCT GGTGATGTTC AACAGCCCGC TGCGCGCCGC CACCGGCACC
ACCTTCGCGC CGATGGGAAT TTCCTACGCC GCCATCGCAG GCGCCGCGCT GATCCTCGAA
CTCACGCGGC GGGTCGCCGG TCTCGCGCTG GTGATCATCG CCGCGCTGTT CTTGACCTAT
GTGTTCGCCG GCCCCTGGCT GCCGGGTTTT CTCGGCTATC CGGGGCTCTC GGTGGGCCGC
TTCTTCAGCC AGGTCTATAC CGATGCCGGG GTGCTGGGGC CGACGACCGC CGTGTCCTCG
ACCTACATCA TCCTGTTCAT CATCTTCGCG GCATTCCTTC AGGCGTCGAA GGTCGGCGAC
TACTTCATCA ATTTCGCCTT CGCCGCCGCC GGACGCGCCC GTGGCGGCCC GGCCAAGGTC
TCGATCTTCG CCTCGGGCCT GATGGGCATG ATCAACGGCA CCAGTGCCGG TAACGTCGTG
TCCACCGGCT CGCTCACCAT CCCGCTGATG AAGAAGGTGG GCTACCCCGC ACGCAGTGCC
GGCGCCATCG AGGCCGCCGC CTCGACGGGC GGCCAGATCA TGCCACCGAT CATGGGGGCC
GGCGCCTTCA TCATGGCGGA GATCACCGGC ATCCCGTACA CCGAGATCGC CATCGCCGCC
CTGATACCGG CCATCCTGTA TTTCGCGTCG GTCTATTTCA TGGTCGACTT CGAAGCGGCA
CGCAAGGGCA TGCGCGGCAT GCGCAAGGAC GAGATCCCGC GCTTCTCCAG GCTGGTCAAG
CAGGCCTACT TGTTCGCGCC CATCATCATT CTGATCGTGG CGCTGTTCAT GGGCTACTCG
GTGATTCGCG CGGGAACGCT GGCCACCGCC TCCGCCGCCG TGGTGAGCTG GGTCTCGCCT
AACAAGATGG GCATCCGCGC CATCCTCAAG GCCCTGCAGC TCGCCGGCAC GATGTCGATC
CAGATCATCG CCGTCTGCGC CTGTGCGGGG CTGATCGTCG GCGTGATCGC GCTGACCGGG
GTCGGAGCAC GGTTCTCCTC GCTGCTGCTG GGGCTGGCCG GCGTCAGCCA GTTGCTGGCG
CTGTTCTTCG CCATGTGCAT CAGCATTCTG CTGGGCATGG GGATGCCGAC CACTGCCGCC
TACGCCGTCG CGGCCTCGGT GGTGGCGCCC GGGTTGATCG ATATCGGCAT CCAGCCGCTG
GTCGCCCACT TCTTCGTGTT CTATTTCGCG GTCGTCTCGG CCATCACGCC ACCGGTGGCG
CTGGCCTCCT ACGCGGCGGC GGGCATCTCG GGCGACAACG CCATGGGCAC CTCGGTGGCC
TCGTTCAAGA TCGGCCTGGC GGCCTTCATC GTGCCCTTCA TGTTCTTCTA CAGCCCGGCA
ATGCTGATGG AAGGCTCCTG GCTGCAGATC CTGCGCGTCG GCGTCACCGC GACACTTGGC
ATCGTGCTGC TGTCGGCCAC CGTGCAGGCG TGGTTCTTCG GCCCGGTCAA GGCTTGGCAA
CGCCTGGTGA TGCTGATCGG GGCGCTGTGC ATGATCTACG GCGGCATCTA CACCGATGTG
ATCGGTCTGA TCATCGGCAT CGGCCTGTTC GCCATGCAGC GCGGGCGCAA CGGCTCGCGG
CCCGCCACCT CCCACTGA
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| Protein sequence | MSQNSHSRPD DRDETAIDAI AEGADDNAGE PNRRAYTGWQ WWLFGILAIA YSSFHLISLN
VYPLETWSFR IIHICGALIL GYGLYAGTRF AEEGKPRSPR WMAALGYALL LPALYALVQV
VLMQQAMSQG AMRIEPNIEA FHFGYPLMLT TAAAILLSWS DRQYQHRLSP ADLVLMVCAL
ASAGYLLVMF NSPLRAATGT TFAPMGISYA AIAGAALILE LTRRVAGLAL VIIAALFLTY
VFAGPWLPGF LGYPGLSVGR FFSQVYTDAG VLGPTTAVSS TYIILFIIFA AFLQASKVGD
YFINFAFAAA GRARGGPAKV SIFASGLMGM INGTSAGNVV STGSLTIPLM KKVGYPARSA
GAIEAAASTG GQIMPPIMGA GAFIMAEITG IPYTEIAIAA LIPAILYFAS VYFMVDFEAA
RKGMRGMRKD EIPRFSRLVK QAYLFAPIII LIVALFMGYS VIRAGTLATA SAAVVSWVSP
NKMGIRAILK ALQLAGTMSI QIIAVCACAG LIVGVIALTG VGARFSSLLL GLAGVSQLLA
LFFAMCISIL LGMGMPTTAA YAVAASVVAP GLIDIGIQPL VAHFFVFYFA VVSAITPPVA
LASYAAAGIS GDNAMGTSVA SFKIGLAAFI VPFMFFYSPA MLMEGSWLQI LRVGVTATLG
IVLLSATVQA WFFGPVKAWQ RLVMLIGALC MIYGGIYTDV IGLIIGIGLF AMQRGRNGSR
PATSH
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