| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2380 |
|---|
| Symbol | |
|---|
| ID | 4027489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 2668291 |
|---|
| End bp | 2669778 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637967582 |
|---|
| Product | methylmalonate-semialdehyde dehydrogenase [acylating] |
|---|
| Protein accession | YP_574426 |
|---|
| Protein GI | 92114498 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACG TATACCACTG GATCGCCGGC GAGCGGCTGA CAAGCGAGCG CACCATCGAC
GTGCTCAACC CGGCCACCGC CGCGCCGGTT CGCCGCCTGG CGATGGCCGA CACCGCCACC
GTGCAACGCG CCATCGACGC CGCCCGCGAA GCCCAGCCCG CCTGGCGCGA CATGCCGCCG
GCCAAGCGCG CCCAGGTGAT GTACCGCTTC AAGACCCTGC TCGAGCGCGA CGCTGACGAG
ATCTGCGCAC TGGTCAGCGA GGAACACGGC AAGGTGCTCG AAGACGCCAT GGGCGAGCTC
AAGCGCGGCA TCGAGAACGT CGAGTATGCC TGCGGCGTGG CGGAACTCCT CAAGGGCGAG
TACTCCCATA ACGCCGGGCC GGGCATCGAC ACCTGGTCCA ACCATCAGCC GCTGGGCGTG
GTCGCCGGCA TCACGCCGTT CAACTTCCCG GCCATGGTGC CGCTGTGGAT GTACCCCATG
GCGCTGGCCT GCGGCAACGC CTTCATCCTC AAGCCCTCCG AGCAGGCGCC CTCGGCCGCC
GTGAAGATGG CCGAACTGCT CGACGAAGCC GGGTTGCCCA AGGGGCTGTT CAGCGTGGTC
CACGGTGATC GCGAGGCCGT CGACGCGCTG ATCGAAGCGC CCGAGGTTCG CGCGCTTTCC
TTTGTCGGCT CCACCCCCGT GGCGCGCAAG ATCTACGAGG GTGGCACCCA GCAAGGCAAG
CGCGTGCAGG CCCTCGGCGG TGCCAAGAAC CACGCCGTGG TGCTGCCGGA TGCCGATCTC
GACAACGCCG CCAGCACCCT GATCGGCGCC GCGTTCGGCA GTGCCGGCGA GCGCTGCATG
GCGATCTCCG TGGCCGTGTG CGTGGGTGAC GCCACCGCCG ACGCCCTGGT CGAGCGTCTC
GCCGCCCAGG CCCGCAAGCT CAAGATCGGC CCGGGTACCG AGCGTGGCCT CGACATGGGC
GCGCTGATCA ACGCCGGCCA GCGCGACAAG GTCGCCGGCT ACATCGAGCA GGGCGCCGCC
GCCGGGGCCG AACTGGTGGT CGACGGCCGC GAGCATCCGC TGGTGGAAGC CTCGCCGGGC
TACTTCCTCG GCGCCACGCT GTTCGACCGG GTCACGCCGG AGATGAGCAT CTACCGCGAC
GAGATCTTCG GCCCGGTGCT GTGCGTGGTC CGTGTCGAGA CCTTCGAGGA CGCCATCGCC
CTGATCAACG CCCACCAGTA CGGCAACGGC ACCTGCGTGT TCACTCGTGA CGGCGAGGCC
GGGCGACGCT TCGCCGATGC CATCGAAGTC GGCATGGTCG GCATCAACGT ACCGCTGCCG
GTGCCGGTCG CCTTCCACAG CTTCGGCGGC TGGAAGGACT CGCTGTTCGG CGACCTGCAC
GCCTACGGCC CCGACGCCGT GCGCTTCTAC ACCCGCCGCA AGGCCATCTC CCAACGCTGG
CCGAAGCGCT CCGCCCAGGA AACCGCCCAG TTCAGCTTCC CCTCCTGA
|
|---|
| Protein sequence | MTDVYHWIAG ERLTSERTID VLNPATAAPV RRLAMADTAT VQRAIDAARE AQPAWRDMPP
AKRAQVMYRF KTLLERDADE ICALVSEEHG KVLEDAMGEL KRGIENVEYA CGVAELLKGE
YSHNAGPGID TWSNHQPLGV VAGITPFNFP AMVPLWMYPM ALACGNAFIL KPSEQAPSAA
VKMAELLDEA GLPKGLFSVV HGDREAVDAL IEAPEVRALS FVGSTPVARK IYEGGTQQGK
RVQALGGAKN HAVVLPDADL DNAASTLIGA AFGSAGERCM AISVAVCVGD ATADALVERL
AAQARKLKIG PGTERGLDMG ALINAGQRDK VAGYIEQGAA AGAELVVDGR EHPLVEASPG
YFLGATLFDR VTPEMSIYRD EIFGPVLCVV RVETFEDAIA LINAHQYGNG TCVFTRDGEA
GRRFADAIEV GMVGINVPLP VPVAFHSFGG WKDSLFGDLH AYGPDAVRFY TRRKAISQRW
PKRSAQETAQ FSFPS
|
|---|
| |