Gene Csal_2346 details

Gene Information

• Locus tag: Csal_2346
• Symbol: holA
• ID: 4027455
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: +
• Start bp: 2636346
• End bp: 2637404
• Gene Length: 1059 bp
• Protein Length: 352 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637967550
• Product: DNA polymerase III subunit delta
• Protein accession: YP_574394
• Protein GI: 92114466
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1466] DNA polymerase III, delta subunit
• TIGRFAM ID: [TIGR01128] DNA polymerase III, delta subunit

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.21014
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTCT TTCCCGACAA ACTGGACGAC GCTCTCGGCA AGCGGCTGCA CCCGGTGTAC 
ATCGTCGCCG GCGACGAGCC GCTGATCCAC ATGGAAGCAT GCGACGCCAT CCGCGCCGCC 
GCGCGCCAGC GCGGCGTCGA GGAGCGCGAG GTGCTGCACG TGGAAAACGG CTTCCAATGG 
GGGCGCCTGA CCGAATCGGC CGCCAGCATG TCGCTGTTCG CCTCGAGCAA GCTCATCGAA 
CTGCGTCTGG GCGGCCAGTC CCCGGGCCAG GAAGGCGCCA AGGCTCTCGA TGCCTACGCG 
CGCCAGGCCA AGGACAGCGA CGACATCCTG CTGATCAGCA GTGCGCGTCT CGACCGGCGC 
GCGCAGTCCA GCGCCTGGTT CAAGGCCCTG GACAAGATCG GCGTGTTCGT GCCGGTGTGG 
CCGGTGGACC ATCAGCGCCT GCACTTCTGG GTGCGCGATC GCGCGAGCCG CCACGGGCTC 
TCCCTGGACA TGGACGCGGC CCGCCTGCTC GGCGAGCGCA CCGAGGGCAA CCTGCTGGCC 
GCCGATCAGG AACTGCAGAA GCTCGCCTTG CTCTACCCCG CCAATGCACG GCTCGACACT 
CAGGCCATCG CCGGTGGCGT GGAAGACAGC GCCCGATATG ACGTCTTCAC GCTGATCGAC 
GCCTGCCTGC GCGGCGAACG CGTGCGTGTC TCGCGCATCG TCCGCGGCCT GCGTGGCGAA 
GGGGTGGAGG CTCCCGTGGT GCTGTGGGCA CTGACCCGCG AGCTGCGCAT CTTCCTGTCG 
CTGGCGCAGC ACCTCGACCA GGGGCAAAGC CTCGACCACG CCTGCAAGGC GCAGCGCCCG 
CCGATTCCCG ACAAGCGGCG GCCGCTCTAT CAGCAAGCCC TGAACCGCAT GCCACTCAAG 
CGACTTCACA AGCTGCTGTT GTTCGCCCAG CGCCTCGATC TGGCGATCAA GGGCGCGGTA 
GCGCTGCCCG TATGGGAAGG TCTCCATGAC CTGGCGCTCA CCCTGGCCGG CGGACGCGGT 
CCCCTGGCCG AGATGGCGTA TTCCTACCGG ATCGCCTAG 

 

Protein sequence

MKVFPDKLDD ALGKRLHPVY IVAGDEPLIH MEACDAIRAA ARQRGVEERE VLHVENGFQW 
GRLTESAASM SLFASSKLIE LRLGGQSPGQ EGAKALDAYA RQAKDSDDIL LISSARLDRR 
AQSSAWFKAL DKIGVFVPVW PVDHQRLHFW VRDRASRHGL SLDMDAARLL GERTEGNLLA 
ADQELQKLAL LYPANARLDT QAIAGGVEDS ARYDVFTLID ACLRGERVRV SRIVRGLRGE 
GVEAPVVLWA LTRELRIFLS LAQHLDQGQS LDHACKAQRP PIPDKRRPLY QQALNRMPLK 
RLHKLLLFAQ RLDLAIKGAV ALPVWEGLHD LALTLAGGRG PLAEMAYSYR IA