Gene Csal_2313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2313 
Symbol 
ID4026272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2598828 
End bp2600159 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content62% 
IMG OID637967518 
Productputative urea short-chain amide or branched-chain amino acid uptake ABC transporter periplasmic protein precursor 
Protein accessionYP_574362 
Protein GI92114434 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID[TIGR03407] urea ABC transporter, urea binding protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00688905 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCATTGGC GCTGCAACAA CAATCAGACC CGCAAGGAGT CGTTCGTGAA CAAGATCACC 
TCCACCGCCG CACTCTTACT CTCGATGGGC ATCGCGCTTC CGGCCGCGGC CCAGGAAGAC
ACCATCAAGG TCGGGATCCT GCACTCTCTT TCCGGGACCA TGGCCATCAG TGAGTCGACG
CTGAAGGATG AGCTGTTGAT GCTCATCGAG CAGCAGAACG AAAACGGCGG GTTGCTGGGC
AAGCAGCTCG AACCCGTGGT GATGGATCCG GCCTCGGACT GGTCGCTGTA CGCCGAGCAG
GCGCGCGACA TGCTCACCGG GGACGACCGG GTCGACGTGA TCTTCGGCAA CTGGACGTCG
GCGTCGCGCA AGGCGGTGCT GCCGGTGGTC GAGGAAGAGA ACGGCCTGCT GTTCTATCCG
GTGCAGTATG AGGGCGAGGA ATCGTCCGAG AACATCTTCT ATACCGGCGC GGCACCCAAC
CAGCAGGCGA TTCCCGCGGT CGACTACCTG ATGAGTCAGG GCGTGGAGCG CTGGGCGCTG
CTGGGTACCG ACTACGTCTA TCCGCGCACC ACCAACAAGA TTCTCGAGGC GTATCTCAAG
GACCACGGCG TCGCCGACGA CGACATCATG GTCAATTACA CGCCGTTCGG CTTCAGCAAT
TGGCAGTCGA TCGTCTCCGA GGTCAAGGAC TTCGGCAGCC AGGGCAAGCA GACCGCCGTG
GTCTCGACCA TCAACGGCGA TGCCAACGTG CCGTTCTACA CCGAGCTTTC CAATCAGGGC
ATCAGTGCCT CCGACATCCC GGTGGTCGCC TTCTCGGTGG GCGAGCAGGA ACTGTCCGGC
ATCGATACCG GGCCGCTGGT GGGACACATG GCGGCGTGGA ACTACTTCAT GAGCGTCGAC
AGCGACGCCA ATTACGACTT CATCGACAAC TGGGTCGAAT ACACCGGTGA CGACATGGCC
GTGACCAACG ATCCCATGGA AGCGCACTAC ATCGGCTTCA ACATGTGGCT GGAGGCGGTG
CGCGAGGCCG GCACCACCGA TGTCGACGCG GTGAAGGATT CGATCATCGG AGTCACGGTG
CCCAACCTCT CCGGTGGCTC CTCGGCGATG ATGCCCAACC ATCACATCAC CAAGCCGGTG
ATGATCGGCG AGATCCAGGA CGACGGTCAG TTCAGCGTGG TCTGGGAAAC CTCGGGCAAT
GTCGCCGGCG ACGCCTGGTC CGACTATCTC CCCGAATCGC AGAACCTGAT CAGCGACTGG
CGCGCGCCAC TGCGCTGCGG AAAGCTCAAC GTCGACACCA TGACCTGCGA GGACGGCGCT
GGCGCCGAGT AA
 
Protein sequence
MHWRCNNNQT RKESFVNKIT STAALLLSMG IALPAAAQED TIKVGILHSL SGTMAISEST 
LKDELLMLIE QQNENGGLLG KQLEPVVMDP ASDWSLYAEQ ARDMLTGDDR VDVIFGNWTS
ASRKAVLPVV EEENGLLFYP VQYEGEESSE NIFYTGAAPN QQAIPAVDYL MSQGVERWAL
LGTDYVYPRT TNKILEAYLK DHGVADDDIM VNYTPFGFSN WQSIVSEVKD FGSQGKQTAV
VSTINGDANV PFYTELSNQG ISASDIPVVA FSVGEQELSG IDTGPLVGHM AAWNYFMSVD
SDANYDFIDN WVEYTGDDMA VTNDPMEAHY IGFNMWLEAV REAGTTDVDA VKDSIIGVTV
PNLSGGSSAM MPNHHITKPV MIGEIQDDGQ FSVVWETSGN VAGDAWSDYL PESQNLISDW
RAPLRCGKLN VDTMTCEDGA GAE