| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2274 |
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| Symbol | |
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| ID | 4026427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 2557718 |
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| End bp | 2560333 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637967478 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_574323 |
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| Protein GI | 92114395 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGATT TAGCAATGCT GGACAGTTTA CTGGATAGCT TCGATATCGA TCTTTCGCAG
TCGCAGCGGT TGCTGACCCT CGAGGTCGCC GGGACGGCGC TGCTGCCGCA TCGCCTGGTG
GGCGAGGACC GCGTGAGCGC CCCCTTCACC TACACCCTCG ACTGCATCTC CCAGCAGAAC
GATCTCGAGC TCAAGACATT GCTGGCCCAG CCGGCCCGGC TTTCGATCCT GCAGGCCGAC
GGCAGCTATC GCCCGCTGCA CGGGCTGGTC TCCGAGGCCG CGCTGCTGGG CGAGGATGGC
GGCGTCACCT ATTACCAGCT CACCCTGGTG CCGTGGCTCA AGATGCTCGC GCTGGGCCGC
GACAGCCGCA TCTTCCAGGA CCGCAGCGTC GTTGATGTCC TCACCCAGGT ATTCGAGGGG
CATGCACTGG CCAGGGGCCG CTACCGCTTC GACCTGCGCC GCGACTACCC CGCGCGCAGC
TACTGCGTGC AGTACCGCGA GAGCGACCTG AACTTCATCA GCCGCCTCTG CGAGGAAGAA
GGCCTCTTCT ACTACACCGA ATTCGCGGGC GATGACGATG ACTTCGACGG CCACCGCATC
GTCTTTACCG ACGATGTCGA TACCACCCAG CCCGTCAGCC CCCAGGCGAT TCGCTTTCAT
CGTCAGGATG CCACCGAGAC CGAGGACGCC CTCAACCAGT GGGGCGGCGT GCGTCAGCAG
CAGCCCACCC GGGTCAGCGT GGGCACCTTC GACTACAAGC AGCCCTCGCT CACCAAGCGC
ACCGGACTGG ATACTCTCAG CGATCAGGGC AACCTGCCGC CGACCGAGGT CTACGACTAC
GCCGGCGAGT ACTACTACCA CGGCTTCGAG CGCGGCGAGC GCCTCACCGA GAACCGCCTC
GAGGCCCATG AATCGCTGGC CAAGCGCTTT CGCGGCAGCG GCGGTGCCCG CCAGCTCCAG
GCCGGGCGCT GGTTCGAACT CACCCAGCAC CCGCTGCACG ACCGGGGCGG CGAGGAAGAA
CGCCAGTTCC TGCTGCTCGG CGTCACCGTC CACGCCGAGA ACGCGCTGCC GGTCTCGACC
CAGCACCAGG CGCTGCCCGG CAGCCTGCAG CCGCAGCTCG ACGCCGCCAA GCAGGCGCAT
GGGCTGGAGA GTGATACCGC TGATCCCACC GGCGAGCGGC TATCGGATTA CGCCACCGGC
GGCACCGGCC ACTTCCTGGT CGATCTCGAG GCCCAGCGGC GCAGCCAGCC CTATCGCCAC
CCGCTGACCC ATCGCCGCCC GGTGATCGGC GGGCCCCAGA CCGCCACCGT GGTCGGCCCC
GCCAACGAGG AGATCCACAC CGATGCCCTC AACCGCGTGC GGGTGCAGTT CCACTGGGAC
CGCCAGGGCC AGCATGACGA GAACTCCAGC GTCTGGCTGC GGGTCTCCCA GCCCAACGCC
GGTGCCGGCT GGGGCGGCGT GTTCGTGCCG CGCATCGGCC AGGAAGTCCT CGTCGACTTC
CTCGAGGGCG ACGCCGACCG GCCGCTGATC ACCGGCCGGG TCTACAACGG CGAGCAGCCC
CCCGACTGGC ACAGCCATGG CCTGCTCTCG GGCTTCAAGA GCAAGACCTA TCGCGGCAGC
AAGTACAACG AACTCGTCTT CGACGACGCC ACCGACCAGG AGCGTGTGCG TCTCAGTTCC
GAAGCCGAGA AGAGCCAGCT CAACCTCGGC TACCTGATCC ACCAGACCGG CAACACCCGG
GGCGCCTTCC GCGGCACCGG GTTCGAGCTG CGCAGCGACG CCTATGGCGC CATCCGCGCC
AACCAGGGGC TCTACCTCAC CAGCTGGGGC CAGCTCGGCG CCAGCGGTGA CCAGCTCGAC
CTCACCCCGG CCAAGCAGCA GCTCGACAGC GCTTACCAGC TCAGCGACAC GCTGAGTCAA
AGCGCCCAGG ATCATAACGC CGAGGCCCTC GACAGTCGTA CACACCTCAA GCAGGCGGGC
GAGGACGCCG ACGACACCTA CGGCAACAGC GAGCAGCTCG CGGATGCCCA GCAGGACAGC
GCCCGTGGTG CCACCGACAG CGGCGGCCGC GGTGAAGCGG CGCGCATGAA AGCCCCCTGG
CTACACCTGG CCTCGCCCGC CGGCATCACG CTGAGCACCC CGGAGTCGAC TCACTTGGCC
CAGGGCCGCT CGCTGAGTGT TTCCAGCGGC GAGGACGTCA ACGTGGCCAC CGGCAAGAGC
CTGGTCGCCT CCATTTCCGA GAAGCTCTCG CTGTTCGTGC AGAAGGCTGG CATCAAGCTA
TTCGCGGCAC GGGGTAAGGT GGAGATGCAG GCGCAGAGTG ACGCGATGGA GTTGACCGCC
GAGAAGGACG TCAAGATCAC CTCCACCGAG GGGCGGGTCG AGATCAACGC CGCCAACGGC
ATTCTACTGA ACAGTGGTGG CGGCTATATC CGCATCGAAG GCGGCAACAT CGACGTCCAC
GGCCCCGGCA AGATCGACGT CAAGGGCGCA CAGCATGTCT TCGGCGGACC GACGAGCCTC
GACGCGGCCA TGCCCGAATT GCCGGAGGGA GAGTGCGAAA AGCAGTTCGC GGGCGCCGAT
AAATCGTCTT CAGGCACCAC GCCCGTGGGA GGCTGA
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| Protein sequence | MADLAMLDSL LDSFDIDLSQ SQRLLTLEVA GTALLPHRLV GEDRVSAPFT YTLDCISQQN
DLELKTLLAQ PARLSILQAD GSYRPLHGLV SEAALLGEDG GVTYYQLTLV PWLKMLALGR
DSRIFQDRSV VDVLTQVFEG HALARGRYRF DLRRDYPARS YCVQYRESDL NFISRLCEEE
GLFYYTEFAG DDDDFDGHRI VFTDDVDTTQ PVSPQAIRFH RQDATETEDA LNQWGGVRQQ
QPTRVSVGTF DYKQPSLTKR TGLDTLSDQG NLPPTEVYDY AGEYYYHGFE RGERLTENRL
EAHESLAKRF RGSGGARQLQ AGRWFELTQH PLHDRGGEEE RQFLLLGVTV HAENALPVST
QHQALPGSLQ PQLDAAKQAH GLESDTADPT GERLSDYATG GTGHFLVDLE AQRRSQPYRH
PLTHRRPVIG GPQTATVVGP ANEEIHTDAL NRVRVQFHWD RQGQHDENSS VWLRVSQPNA
GAGWGGVFVP RIGQEVLVDF LEGDADRPLI TGRVYNGEQP PDWHSHGLLS GFKSKTYRGS
KYNELVFDDA TDQERVRLSS EAEKSQLNLG YLIHQTGNTR GAFRGTGFEL RSDAYGAIRA
NQGLYLTSWG QLGASGDQLD LTPAKQQLDS AYQLSDTLSQ SAQDHNAEAL DSRTHLKQAG
EDADDTYGNS EQLADAQQDS ARGATDSGGR GEAARMKAPW LHLASPAGIT LSTPESTHLA
QGRSLSVSSG EDVNVATGKS LVASISEKLS LFVQKAGIKL FAARGKVEMQ AQSDAMELTA
EKDVKITSTE GRVEINAANG ILLNSGGGYI RIEGGNIDVH GPGKIDVKGA QHVFGGPTSL
DAAMPELPEG ECEKQFAGAD KSSSGTTPVG G
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