Gene Csal_2273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2273 
Symbol 
ID4026426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2555012 
End bp2557681 
Gene Length2670 bp 
Protein Length889 aa 
Translation table11 
GC content65% 
IMG OID637967477 
ProductATPase AAA-2 
Protein accessionYP_574322 
Protein GI92114394 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID[TIGR03345] type VI secretion ATPase, ClpV1 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTCTCA AATCCCTCTT CGACAAACTC AACGATCCCT GCCGCGAGGC CACTGAAGGC 
GCCGCCGCGC TATGCCTGGC GGAGCGCCAG TACGACGTGG ACATCGAACA CCTGTTGCTC
AAGCTGCTCG ACAGCGACGA CAACGATTTC CTGCGCATCG CACGGCACTA CGACGTGTCG
CTCGATCGCC TGGCGACCCA GCTCGAGGAC ACGGTGTCCA CCTTCAAGAC CGGCAATACC
CGAACGCCTG CCCTGTCGCC ACGCATCACT CGGCTGATCG AGCGTGCCTG GGTCATCGCC
TCGATCGATC ATGGCGAAGC CCAGATTCGC AGCGGCCACC TGCTGCTGGC ATTGCTGAAG
GACGATGAAC TGCGCCGCGT ACTGCTCGAT GGGGCCCGTG AGCTGGAACG CATCAATGTC
GACGACCTGC AGGCACACCT CGATGACCTG ATCGGGGGCA GCAGCGAAGA TCAGTACGTA
CGCCCGCTCG GCGAAGGAGC GAACGAGGAT GGCCAGAGCG CTCGCCAGGC ATCGGACGCC
AGGAGCGAAG GCAGTCGCTC CGGCAAGAGC AAGACCCCGG CGCTGGATCA ATACACCATC
GACCTGACCG GCAACGCCCG CGCCGGTCGC ATCGACCCGG TGCTCGGCCG CGAGGAAGAA
GTGCGCCAGA TGGTGGACAT CCTCACCCGG CGTCGCCAGA ACAACCCGAT CCTCACCGGG
GAGGCCGGCG TCGGCAAGAC CGCCGTGGTC GAAGGCCTGG CACTGCGCAT CGTCGACGGC
GATGTACCGC CACCGCTCAA GAACGTCGAG CTGCGCACGC TCGATCTGGG GCTTCTGCAA
GCCGGCGCCG GGGTCAAGGG CGAGTTCGAG AACCGGCTCA AGAACGTGAT CGAGGAAACC
AGGCGCAGCC TGCACCCGAT CATCCTGTTC ATCGACGAGG CCCACACCCT GATCGGCAGC
GGCGGACAGG CCGGTCAGGG CGATGCCGCC AACCTGCTCA AGCCGGCGCT GGCACGCGGG
GAGCTGCGCA CCATCGCCGC CACCACCTGG GCGGAATTCA AGAAGTACTT CGAGAAGGAC
GCCGCGCTGG CCCGTCGCTT TCAGGTCGTC AAGGTCGAGG AACCGGCCGA ACCGGTGGCC
ATCAACATGC TGCGCGGTCT GAACGAGCGC ATGCAGGACC ACCACAAGGT GACCATTCTC
GATGACGCCA TCGTCCAGGC CGTACGCCTG TCGCACCGCT ACATCACTGG CCGCCAGTTG
CCGGACAAGG CCGTCAGCGT GCTCGATACC GCCTGCGCGC GGGTCGCCCT GGCACAATCG
TCGCAGCCGG CGGCGCTCGA AGATGCCTAC CGCCGCGTCG ACAACCTCAA CAGCGAGATT
GCCGTTCTCC AGCGCGAACA GCGTGAAGGC AGCGATCACG CCGAAACGCT GGCCGCGCTC
GACGAACAGC TTACCGCGAC CCAGGGCGAG ATAGACGACC TGCGCGCACG CTGGGAGCGC
GAGCAGGAGA TCGTGACGCG CCTCAAAGCG CTGGAAGCGG AACGCGAAGC CATCGAGGCC
GGCCAGCAAA GCGGCGATGT CGACGCGTTG AGCCGGCAGA TCGGCGAGGT CCGGCGCGAA
CTGGCCGAGG TCCAGGGCGA GCACTCGCTG GTCCACGGCC ATGTCGACGG CAACGTGATC
GCCGAGGTGA TTTCCAACTG GACCGGCATT CCACTCGGCA AGATGATGCG CGACGAGATC
GCCACCGTGC AGCGCCTCCC CGAACTGCTC GGCGAGCGCG TGCTGGGCCA GGACCATGCG
CTGGCCGAGA TCGGCAAGCG CATCGCGATC TCGCGGGCCC GGATGGAGGA CCCCAACAAG
CCGATCGGAG TCTTCCTGCT GCTCGGCCCC AGCGGCGTCG GCAAGACCGA AACCGCGCTG
TCGCTGGCCG ATACTCTCTA CGGTGGTGAA CGTAACGTCA TCACCATCAA CATGTCCGAA
TATCAGGAGG CGCATACCGT CTCCAGCCTC AAGGGCTCAC CTCCCGGGTA CGTCGGCTAC
GGCGAAGGCG GCGTGCTGAC CGAAGCGGTG CGCCGCAAGC CCTACAGCGT GGTACTGCTG
GATGAAGTCG AGAAAGCGCA CCCGGACGTG CTGGAGCTGT TCTTCCAGGT GTTCGACAAG
GGCGTGCTGG ACGACGGCGA AGGCCGCGAG ATCAACTTCC GCAACACCGT GATCCTGCTC
ACGTCCAACG TCGGTACCGA CGACATCATG CAGCAGTGTC TGGGCGCCGA GTCCCTGCCC
GCCCCGGGTG CGATCGTCGA CAGCCTGCGC GATCAGCTCA ACGCCGTGTT CAAGCCGGCG
TTTTTGGGCC GTTTGAACAT CATTCCCTAC TACCCGGTGC AGAAAGAGAT TCTGCACAAC
ATCGTTCGGC TCAAGCTCGA CCGCATCAAG CATCGCTTCG AATACAACCA CCGCGCCGAC
TTCGACTACG ATCCGGCGAT CATCGAAGCC ATCGCCGAGC GCTGCACCGA CAGCGACAGC
GGTGCGCGCA ATATCGACAA CATTCTCTCC GGCAGCCTGA TGCCGACCAT CGCCACGCAG
GTACTGGACC GCATGGCCAG CGGTGAATCC ATCGAACAGC TCACGGTCAG CCTCGACGCT
CAGGGGGAGT TCGCATATGC CCTGCGCTGA
 
Protein sequence
MSLKSLFDKL NDPCREATEG AAALCLAERQ YDVDIEHLLL KLLDSDDNDF LRIARHYDVS 
LDRLATQLED TVSTFKTGNT RTPALSPRIT RLIERAWVIA SIDHGEAQIR SGHLLLALLK
DDELRRVLLD GARELERINV DDLQAHLDDL IGGSSEDQYV RPLGEGANED GQSARQASDA
RSEGSRSGKS KTPALDQYTI DLTGNARAGR IDPVLGREEE VRQMVDILTR RRQNNPILTG
EAGVGKTAVV EGLALRIVDG DVPPPLKNVE LRTLDLGLLQ AGAGVKGEFE NRLKNVIEET
RRSLHPIILF IDEAHTLIGS GGQAGQGDAA NLLKPALARG ELRTIAATTW AEFKKYFEKD
AALARRFQVV KVEEPAEPVA INMLRGLNER MQDHHKVTIL DDAIVQAVRL SHRYITGRQL
PDKAVSVLDT ACARVALAQS SQPAALEDAY RRVDNLNSEI AVLQREQREG SDHAETLAAL
DEQLTATQGE IDDLRARWER EQEIVTRLKA LEAEREAIEA GQQSGDVDAL SRQIGEVRRE
LAEVQGEHSL VHGHVDGNVI AEVISNWTGI PLGKMMRDEI ATVQRLPELL GERVLGQDHA
LAEIGKRIAI SRARMEDPNK PIGVFLLLGP SGVGKTETAL SLADTLYGGE RNVITINMSE
YQEAHTVSSL KGSPPGYVGY GEGGVLTEAV RRKPYSVVLL DEVEKAHPDV LELFFQVFDK
GVLDDGEGRE INFRNTVILL TSNVGTDDIM QQCLGAESLP APGAIVDSLR DQLNAVFKPA
FLGRLNIIPY YPVQKEILHN IVRLKLDRIK HRFEYNHRAD FDYDPAIIEA IAERCTDSDS
GARNIDNILS GSLMPTIATQ VLDRMASGES IEQLTVSLDA QGEFAYALR