Gene Csal_2272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2272 
Symbol 
ID4026425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2554023 
End bp2555015 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content63% 
IMG OID637967476 
Producthypothetical protein 
Protein accessionYP_574321 
Protein GI92114393 
COG category[S] Function unknown 
COG ID[COG3520] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03347] type VI secretion protein, VC_A0111 family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCCTGT TGCGGCTGCA CTACAGCCGC ACCGGGCGCA TCGATCCCGA AAATCGCCCG 
CATCAGGACC CGCTGCGTTT TCGTTCGCTG CTCTCGCTCA ACTTCCCCCC CAGCGAGATC
AGTGACCTCT CCTTCGAGAG CGACAAGGTC CGCTCCGCCA ACGGCGAGCC GCTGAGTGAG
GTCCAGGTCA CGTTCATGGG GCTGGTGGGC CCGTCCGGGG TCCTGCCGCG CCCCTATACC
GAACTGCTGA TCAACCGGCA TATCGAAAAA CGCGACGATG CCGCCCATGC GTTCATGGAT
TTCTTCTCGC ACCGCATGAC GGCGCTCTTC TACGAGGCGT GGCAGAAATA TCGCTTTCAT
ATCGAATACG AGCGCAAGGG CAGCGCCGAC TTCGAAGACT GGCTGCTGCA CCTGGTGGGC
TTCACGCCCA AGACCATGGA AAAAGCGCTC GATCGCGATG ACGACCCGAC GTCGCTGCGA
CGCAACCTGT TCAGCTGGTT TTCCGGGCTC TTGACCCAGC GCCCACGCAA TGCCGGCAAC
CTCGAGGCGA TTCTGGAATA CACCTTCCAG CTGCCCTGCC GGGTCGCGCC ATTTTCCGGC
CGCTGGATAC GCCTAGACCC GGCGCAGTAC ACCCGGCTCG GACAGGCCAA CGCCAGGCTT
GGCGAAAGCG CCATCGCGGG GACACGGGTG CGCGACTACC AATCGGCCTT CCGGATCACC
TTTGGCCCAC TCGACCTGGA TGCCTACCGT TCGTTGCTGC CCGAGACCGA TGCCCACCAG
AAGCTGCTGA AACTGGTGCG CTTCTATGCC GGCATCGAAC TCGATTTCGA GATCGAGCTC
ATTCTCGACA AGAACTGCAT TCCTGCCCCC CGGCTGGGCG CGAGGGGCAA CGTCAGCCTG
GGACGCCTGG GTTGGCTCAA CTCGAGTGAT CGACCGGCCG TCTCCCACGG CCATGCACTC
TTCGACATTC CCTTTGATGG AGCCACGGCG TGA
 
Protein sequence
MRLLRLHYSR TGRIDPENRP HQDPLRFRSL LSLNFPPSEI SDLSFESDKV RSANGEPLSE 
VQVTFMGLVG PSGVLPRPYT ELLINRHIEK RDDAAHAFMD FFSHRMTALF YEAWQKYRFH
IEYERKGSAD FEDWLLHLVG FTPKTMEKAL DRDDDPTSLR RNLFSWFSGL LTQRPRNAGN
LEAILEYTFQ LPCRVAPFSG RWIRLDPAQY TRLGQANARL GESAIAGTRV RDYQSAFRIT
FGPLDLDAYR SLLPETDAHQ KLLKLVRFYA GIELDFEIEL ILDKNCIPAP RLGARGNVSL
GRLGWLNSSD RPAVSHGHAL FDIPFDGATA