| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2247 |
|---|
| Symbol | |
|---|
| ID | 4026057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 2520062 |
|---|
| End bp | 2520958 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637967452 |
|---|
| Product | Sel1-like protein |
|---|
| Protein accession | YP_574297 |
|---|
| Protein GI | 92114369 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0312034 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATGCGCT TGCAATCAAG CGTGATGTTT TTGAGATGGG GGTGTAATAT GAAATGGGTT
TTTTCTTTGT TGCTATTGTT TTTCTTTCAC TCGGCTTGTG CTGGTATCCT TTTCCAAGAT
CCTACTAGAG ATGAACTGAA TGCTGCTATA AAAGATATGA CGCTATCTGG TCTTGAGAAA
ATGGTGGGAG ATGATAAAGG GAGTGGAGAT TATTATCTTG GCTTGATTTA TTTGAATGGT
TCTAAGCGCT TTGGGGTCGA GAAAAACTGC GATAAGTCGT CTGAGTTATT GCGTCAGGCA
TGGCAAAAGG GGATTGTAGA TGCGGGCTAT ATGCTTTCTG TAATGAGCTA TCGCGGGATT
TGTATGGAGA AAGATTTTAA TCGTGCAAAG ACCTTGGCTC AAAAAACGGC CGATGAAGGG
TACTTACTCT CCCAGCGTAT GCTGGGTCGT GCTTATTTGG GAAGTGAGTG GCAAGGGTTA
TATAAAAAAA ATTTTGACAA GGCTGTTTTT TGGCTTGGAA AAGCTGGTGA GTCTGGCGAC
AGCGAGTCGG CTGCAAAGCT CTCTTATTTA TATCGTGAGG GTGTCGGTGT AAAGAGGGAC
GAAAAGCTCT CTTTTTACTG GCTCAAAAAG GCCAGTTTTT CAAGGTTTGA TCCGGGTGAA
ATAATTTATT TCCCCAGTCT GGCAGAATAT TATGAAAATG GCATCGGTAC GAGTGTGAAT
CTTGTTGAGG CATATAAGTA TTATGATCTC AGTGGCTCCG CTGGTGTCGA TGACAAGCAA
CGCATTGCCA AAAAAATGAC CCAAGATCAG ATCGATGAAG CCATTCGCCA ATCTCAAGAA
TGGCAGAAAG AACATAACGT TCAGGTTGGT GGCGGTTCTA TTCGCCGTGC CAACTGA
|
|---|
| Protein sequence | MMRLQSSVMF LRWGCNMKWV FSLLLLFFFH SACAGILFQD PTRDELNAAI KDMTLSGLEK
MVGDDKGSGD YYLGLIYLNG SKRFGVEKNC DKSSELLRQA WQKGIVDAGY MLSVMSYRGI
CMEKDFNRAK TLAQKTADEG YLLSQRMLGR AYLGSEWQGL YKKNFDKAVF WLGKAGESGD
SESAAKLSYL YREGVGVKRD EKLSFYWLKK ASFSRFDPGE IIYFPSLAEY YENGIGTSVN
LVEAYKYYDL SGSAGVDDKQ RIAKKMTQDQ IDEAIRQSQE WQKEHNVQVG GGSIRRAN
|
|---|
| |