Gene Csal_2228 details

Gene Information

• Locus tag: Csal_2228
• ID: 4026420
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: +
• Start bp: 2499369
• End bp: 2499863
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637967433
• Product: PTS IIA-like nitrogen-regulatory protein PtsN
• Protein accession: YP_574278
• Protein GI: 92114350
• COG category: [G] Carbohydrate transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
• TIGRFAM ID: [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCCGTTG AATCCGCCAT GACACTGGAA AGCATCCTGC CCCCCGAGCG CGCCCTCTTC 
GGCGTTGCCG GGGGGAGCAA GAAGCGTGTG CTGGAATTCT TCAGCACCTT CATCGCCCAG 
AATACGCCTA GCCTCGACAG CCAGGAGGTC TTCGGCCGTC TCATCGGTCG TGAACGCCTG 
GGAAGCACCG GCATCGGCAA TGGCGTTGCC ATTCCGCATG CGCGCAACCC GCATTGCAAG 
GCGCCCATCG CCGGTTTTCT GCGTCTTCAG GACCCCATCG ACTTCGATGC GATAGACGGC 
GAGCCCGTCG ACCTGATATT TGTGCTGCTG GTCCCGGAAG AAGCCGATGA CGCCCACCTG 
TCGCTGCTCG CCCAGGTCGC TGCCATCATG AACGACAGCG CCATCCGTAG CAGGCTGCGA 
CAAGCGCAGA CCCAACGGCA ACTCTACGAT ACCCTGATCG AGGCCATACG CCAGCAAGAC 
ACCCGCGCCA GCTGA 

 

Protein sequence

MPVESAMTLE SILPPERALF GVAGGSKKRV LEFFSTFIAQ NTPSLDSQEV FGRLIGRERL 
GSTGIGNGVA IPHARNPHCK APIAGFLRLQ DPIDFDAIDG EPVDLIFVLL VPEEADDAHL 
SLLAQVAAIM NDSAIRSRLR QAQTQRQLYD TLIEAIRQQD TRAS