| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2226 |
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| Symbol | |
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| ID | 4026418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 2497501 |
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| End bp | 2498934 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637967431 |
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| Product | sigma-54 RpoN |
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| Protein accession | YP_574276 |
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| Protein GI | 92114348 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCATGA AACCTACGCT TCAGCTTCGC GTCGGCACCC AGCTGACGAT GACGCCTCAG
TTGCAGCAAG CGATCCAGCT CTTGCAGCTC TCGACGCTGG ATTTGCGTCA GGAGATCCAG
CAGGCGCTGG ACGCCAACCC CATGCTGGAA CTCGAGGAAC ACTTCGACGA GCGCGAAGTC
AGCGAGACGC AGGACGACGA CTGGAGCAGC GAAATTCCGG AAGACCTGCC GCTGGACAGC
GACTGGAGCG ATACCTACCA GGACGCCGGG CTCGGCTCAT TGAACGGCAG CGGGGGCAGC
GAGGAAGGCC CCGACATCGA GCGCAACACG GCGCACACCA GCCTTCACGA TCATCTGGGC
TGGCAACTGG CCATGACCGA CATGACGCCA CGCGAACATG CGATCGCCGA GAGTCTGATC
GATGCCGTGG GCGCCGATGG CTACCTTACC GTGTCGCTCG AGGAGCTTCT CGATGGGCTG
CGCGGTCAGG GGTTGGCCGG CCTCAAGATC GGTGACGTCG AGCAGGTCAT GATGCGCGTG
CAGCAATTCG ACCCCACGGG CGTCGCCGCT CGCGATCTGC GCGAATGTCT CCTGCTGCAG
CTGGGCGCCC TGCCCGAGGA CATGCCGCTG CTTCCCCAGG CCAAGCGCCT GGTGCGTCAA
TTCCTCGACG CGCTCGCCGG CAACGACCGC AAGCTGCTCA AACGGCGCCT GCGTCTCGAA
GAGGCGGAAC TCGACCATAT CATCGCCCTC ATCCGCACGC TCGACCCGCG CCCCGGTCTG
GCCTTCGAGG ACAGCGACAA CGATTACGTC ATCCCCGACC TCATCGCCCG CCGCGTTCGT
CAGGAATGGC GCATCGAGCT CAATCCCGAC GCCTTGCCGC GCGTCCGCAT CCAGCCGGAT
TACGCCGCTC TGATCAAGCG TGCCGACAAG AGTGACGACA ACACCTTCCT CAAGCAGCAC
CTGCAGGAAG CCAAGTGGCT GCTCAAGAGC CTGTCTAGCC GTAACGACAC CCTGTTGCGC
GTGGGCCGCG AAATCATGGC CCGTCAGCTC GACTTCCTCG AGCATGGCGA AGAAGCGATG
AAACCGTTGA TCCTCGCCGA TATCGCCGGC GCGGTGGACA TGCACGAATC GACCATTTCA
CGCGTCACGA CGCAGAAATT CATTCATACC CCACGTGGCG TGTTCGAGCT GAAATACTTC
TTCTCCAGCC ATGTGGGCGG TGGCCACGGC GAAGGCGACG CCCATTCCAG CACCGCGATA
CGCGCCCGGC TGAAGAAGCT GATCGGCGAA GAGCCGCCAC GCAAGCCGTT GTCCGACAGC
AAGCTCGTCG ACCTGCTGGC ACAGGACGGC ATTCAGGTCG CACGCCGCAC GGTGGCCAAG
TATCGTGAAG CGATGGGCAT CCCCTCCTCC AGCGAACGCA AGCGCCTGGC CTGA
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| Protein sequence | MSMKPTLQLR VGTQLTMTPQ LQQAIQLLQL STLDLRQEIQ QALDANPMLE LEEHFDEREV
SETQDDDWSS EIPEDLPLDS DWSDTYQDAG LGSLNGSGGS EEGPDIERNT AHTSLHDHLG
WQLAMTDMTP REHAIAESLI DAVGADGYLT VSLEELLDGL RGQGLAGLKI GDVEQVMMRV
QQFDPTGVAA RDLRECLLLQ LGALPEDMPL LPQAKRLVRQ FLDALAGNDR KLLKRRLRLE
EAELDHIIAL IRTLDPRPGL AFEDSDNDYV IPDLIARRVR QEWRIELNPD ALPRVRIQPD
YAALIKRADK SDDNTFLKQH LQEAKWLLKS LSSRNDTLLR VGREIMARQL DFLEHGEEAM
KPLILADIAG AVDMHESTIS RVTTQKFIHT PRGVFELKYF FSSHVGGGHG EGDAHSSTAI
RARLKKLIGE EPPRKPLSDS KLVDLLAQDG IQVARRTVAK YREAMGIPSS SERKRLA
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