Gene Csal_2224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2224 
Symbol 
ID4026416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2496083 
End bp2496607 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content66% 
IMG OID637967429 
ProductOstA-like protein 
Protein accessionYP_574274 
Protein GI92114346 
COG category[S] Function unknown 
COG ID[COG1934] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03002] lipopolysaccharide transport periplasmic protein LptA 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACAC GAACCTTGAC GGTCGCGCTG GCATGCGCGG CACTGGGCCT GGCCAGTCAC 
GCGGCCCTGG CGCTGGAAAG CGATGCCAGC CAGCCCATCG AGATCGCCGC CGACCAGTTG
GATCTCGACG ATAACGCCGG CACCGCCGTC TACACCGGCG ACGTCGACAT GCAGCAGGGC
AGCATGCGCC TGACCGCGGC ACGCGTGGAG ATCGAGCGCA ACGCGCAGGG CGAGGTCTCC
ACCGTCACCG CCCACGGCAG CGGTAGCGAG CGCGCCTATC TCGAGCAGAA GCCTTCACCG
GACGAGCCGG TGGCCAAGGG CTGGGGCGAC ACCGTGATCT ATCATGCCGG CGAACGCCGC
GTCGAACTCA TCGATCGCGC TCAGCTTCAC CAGGGCGGAG ACACCTTCAA CGGTGCCTAT
GTCGAATATT TCCTCGATCG CCGCCAGGTC CAGGCGCGCT CCGACGACGA CGGTGAAGGC
GATCAGCGCG TGCGCATGAC GCTGACCCCG CGCAATGACC AATGA
 
Protein sequence
MMTRTLTVAL ACAALGLASH AALALESDAS QPIEIAADQL DLDDNAGTAV YTGDVDMQQG 
SMRLTAARVE IERNAQGEVS TVTAHGSGSE RAYLEQKPSP DEPVAKGWGD TVIYHAGERR
VELIDRAQLH QGGDTFNGAY VEYFLDRRQV QARSDDDGEG DQRVRMTLTP RNDQ