| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2165 |
|---|
| Symbol | |
|---|
| ID | 4026659 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 2434382 |
|---|
| End bp | 2436634 |
|---|
| Gene Length | 2253 bp |
|---|
| Protein Length | 750 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637967370 |
|---|
| Product | bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase |
|---|
| Protein accession | YP_574215 |
|---|
| Protein GI | 92114287 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase
[COG0287] Prephenate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.166945 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGCAA TGCCATGTGC CCCCGCCGAG CGGGGCATCC TCATCGTCGG CCTGGGGCTG
ATCGGCGGCT CCCTGGCCGC GGCCCTCAAG GCATCGGGGT ATCGGGGACG CATCGTGGCC
TGCGACTGTG ATGCCGACGA GGTGGCACGC GGGATCGACA TGGGGTTGAT CGATGACGGC
GGCACGCAGC TCGCCCCTTG GGTCGCCGAG AGTTCGCTGA TCGTGCTGGC GGTGCCGGTG
CTGGCAATGG AAGACGTGTT GCGAACGCTG GCGCCTCGGC TCGACGCGCA GGTGGTCACC
GACGTGGGCA GCACCAAAAG TGCCATCGAA GCGGCAGTGG TGCGGGTCTT CGGGCATCTG
CCGCCGCGTT TCGTGCTCGG CCATCCGATC GCGGGCTCCG AGAAAAACGG CGTCGCGGCC
GCGGATGCGT CACTGTATCG ACAGCACAAG GTGATACTGA CGCCCCGCGA GGATACCGAT
CCCGACGCCT TGGCCCGCGT GCGCGCCCTG TGGGCGGCAT GCGGTGCACA GTTGCTGGAA
ATGACACCGG AGCGGCACGA TCAGGTGCTG GCCCGGACCA GCCATCTTCC GCATCTGCTG
GCGTTCTCGC TGGTGGATAC CCTGGCCCGT CAGGACGAGC GCCTGGATAT CTTTCGTTAC
GCGGCGGGCG GGTTTCGCGA TTTCACCCGG ATCGCGGGCA GCGATCCCGT CATGTGGCGG
GACATCTTCA GTGCCAACCG CGACGCGGTG CTCGGTGCGC TGGACGAATT CGAAGCCGGG
GTGGCGCGGC TACGGCGCGC CGTGACCGAG GGCGATGGCG ATGCCATGTT GGCGGTATTC
GACCGTGCCA GCCATGCACG GCAATACTTC GATACGCTTT TGAACCAGAC GAGTTATCAG
GCGATGGAAC AACGCAATAT CCGCTACCGT GTGAGTCCCG GTGGTGCCGT CCGCGGTCAG
ATCCGCGTCC CCGGCGACAA GTCGATCTCT CACCGCTCGA TCATGCTCGG CGCGCTGGCC
GACGGCGTGA CCGAGGTGCA CGGCTTTCTC GAAGGCGAGG ACAGCCTGGC GACCCTGCAG
GCGTTTCGTG AAATGGGCGT GGCCATCGAA GGGCCGCATC ACGGCCGCGT GACGATTCAT
GGAGTCGGGC TGCACGGCTT GACGGCGCCC GCCGGGCCGC TCTACGTGGG CAACTCGGGG
ACGGCCATGC GTCTGTTCGC CGGGCTGCTG GCGGGGCAGG CCTTCGATAC CGAGCTGACC
GGCGATGTCT CGCTGAACAA GCGTCCCATG GGGCGCATCG CCGATCCGCT GCGCGAGATG
GGGGCGGTGA TCGAAACCGC GGAGGGCGGC CGGCCGCCGC TGACGATCCG CGGCGGGCAG
GCGCTTTCCG GCATCCGCTA CGACATGCCC ATGGCCAGCG CCCAGGTGAA GTCCTGCCTG
CTGCTGGCGG GACTCTATGC CGAGGGGGAA ACGCGAGTGC GCGAGCCGGC GCCGACGCGC
GATCATACCG AGCGCATGCT CAACGGCTTC GGGTACCCGG TGCAGCGCGA CGGCGATGAA
GCCTGGCTGC AGGGAGGCGG TCGCCTGGCG GCATCGCCCA TCGATGTGCC GTCGGATATT
TCATCGGCCA CGTTTTTCCT GGTGGCGGCG GCCATCACCC CGGGGTCGGA CCTGCTGCTG
GAGCATGTCG GCATCAATCC GACGCGTATC GGCGTGATCA ACATACTCCA GGCCATGGGG
GCCGATCTCA CCCTTCAGGA GCCGCGCGAG GTGGGGGGCG AGCCGGTGGC CGACATCCGC
ATTCGCTATG CGCCGCTCAA GGGCATCGAC ATTCCGACCG ATCAGGTGCC GCTGGCCATC
GATGAGTTCC CTGCGCTGTT CGTCGCCGCG GCCAATGCCG AGGGCGTGAC CCGGCTGCGC
GGCGCGGAAG AGTTGCGCGT CAAGGAATCC GATCGCATCC AGGCGATGGC CGACGGCCTG
ACCACGCTGG GCGTGGACAA TACCGTGTAT CCGGACGGTA TCGATATCGT CGGGCGGGCC
AGCGCGGACG AGACGCCGGC AGCACACTAC CGCGGCGGAC AGGTCGATAG CCTGGGCGAT
CACCGTATCG CGATGGCCTT TGCCGTGGCG GCGCTGAGGG CCAGCGACGA GATCGTCATC
GATGACTGCG CCAACGTGGC CACCTCGTTC CCCGGCTTCG TGGATCTCGC GCGTCGCGTG
GGGCTGGTGC TGGACGAGCA GGAGGTGTCA TGA
|
|---|
| Protein sequence | MSAMPCAPAE RGILIVGLGL IGGSLAAALK ASGYRGRIVA CDCDADEVAR GIDMGLIDDG
GTQLAPWVAE SSLIVLAVPV LAMEDVLRTL APRLDAQVVT DVGSTKSAIE AAVVRVFGHL
PPRFVLGHPI AGSEKNGVAA ADASLYRQHK VILTPREDTD PDALARVRAL WAACGAQLLE
MTPERHDQVL ARTSHLPHLL AFSLVDTLAR QDERLDIFRY AAGGFRDFTR IAGSDPVMWR
DIFSANRDAV LGALDEFEAG VARLRRAVTE GDGDAMLAVF DRASHARQYF DTLLNQTSYQ
AMEQRNIRYR VSPGGAVRGQ IRVPGDKSIS HRSIMLGALA DGVTEVHGFL EGEDSLATLQ
AFREMGVAIE GPHHGRVTIH GVGLHGLTAP AGPLYVGNSG TAMRLFAGLL AGQAFDTELT
GDVSLNKRPM GRIADPLREM GAVIETAEGG RPPLTIRGGQ ALSGIRYDMP MASAQVKSCL
LLAGLYAEGE TRVREPAPTR DHTERMLNGF GYPVQRDGDE AWLQGGGRLA ASPIDVPSDI
SSATFFLVAA AITPGSDLLL EHVGINPTRI GVINILQAMG ADLTLQEPRE VGGEPVADIR
IRYAPLKGID IPTDQVPLAI DEFPALFVAA ANAEGVTRLR GAEELRVKES DRIQAMADGL
TTLGVDNTVY PDGIDIVGRA SADETPAAHY RGGQVDSLGD HRIAMAFAVA ALRASDEIVI
DDCANVATSF PGFVDLARRV GLVLDEQEVS
|
|---|
| |