| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2163 |
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| Symbol | rpsA |
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| ID | 4026657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | - |
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| Start bp | 2431813 |
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| End bp | 2433492 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637967368 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_574213 |
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| Protein GI | 92114285 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0054934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAA GCTTTGCTGA ACTGTTCGAA CAGTCTCTCC AGGACATCAA CATGGAGCCC
GGTGCCATCG TCATGGCAAC CGTGGTCGAC ATCGAAGGTG ACTGGATTAC CGTCAACGCG
GGTCTGAAGT CCGAGGGGCA AATCCCCGCG GCGCAGTTCC GTGATGACAA CGGCGAGTTG
ACTATCGCCG TGGGCGATGA AGTCAAAGTT GCCCTGGAAG CCGTCGAGGA CGGTTTCGGC
GAGACACGCC TGTCTCGCGA GAAGGCCAAG CGTGCCGAGG CCTGGAAAGA GCTGGAGGCG
GCCTTCGAGA AGGACGAAAT CGTCAAGGGC GTGATCAACG GCAAGGTCAA GGGCGGCTTC
ACGGTCGACG TTTCTTCCAT CCGTGCCTTC CTGCCCGGTT CTCTCGTCGA TGTCCGTCCG
GTGCGCGATA CCGCTCACCT GGAACACAAA GAGCTGGACT TCAAGGTCAT CAAGCTCGAT
CCGAAGCGCA ACAACGTCGT GGTCTCTCGC CGTGCCGTTC TCGAAGCCGA GAACAGCGCC
GAGCGCGAAG CGCTGCTGGC GACCCTGCAG GAAGGTCAGC AGATCAACGG TATCGTCAAG
AACCTCACCG ACTACGGTGC GTTCGTCGAT CTGGGTGGCG TTGACGGCCT GCTGCACATC
ACCGACATGG CCTGGAAGCG CATCAAGCAT CCGAGCGAAA TCGTGGCCGT CGGCGACGAA
GTCAACGTCA AGGTGCTCAA GTTCGACCGC GAGCGCAATC GCGTGTCTCT CGGCTTGAAG
CAGCTGGGCG AAGATCCCTG GGTCAACATC AAGGATCGTT ACCCGGAAAA CACGCGCGTC
AACGCCCGCG TCACCAACCT CACCGACTAC GGCTGCTTCG CCGAGCTGGA AGAGGGTGTC
GAAGGCCTGG TCCACGTCTC CGAAATGGAC TGGACCAACA AGAACATCCA TCCGTCGAAA
GTCGTTCAGG TCGGCGACGA CGTCGAAGTC ATGGTGCTGG ATATCGACGA AGAGCGTCGT
CGTATCTCCT TGGGCATCAA GCAGTGCACC ACCAACCCGT GGGAAGACTT CAGCGCGCGT
TACAACAAGG GCGACCGTGT TGCCGGGACC ATCAAGTCGA TCACCGATTT CGGTATCTTC
ATCGGTCTCG AAGGCGGCAT CGACGGCCTG GTTCACCTGT CCGACATCTC CTGGAGCGAG
CCCGGCGAAG AAGCCGTGCG CAAGTTCAAG AAGGGTGATG AAGCCGAAGC GGTCATCCTG
TCGATCGATC CGGAGCGTGA GCGCATCTCG CTGGGCATCA AGCAGCTCGA AACCGATCCG
GTTTCCGAGT ACCTGGCCGT GAATGACAAG GGCAGTGTCG TCACTGGCCG TGTCGTCGAA
GTCGACGCCA AGGAAGCTCA CGTCGAGCTG GCCACCGATG TCGTCGCCGT GCTCAAGGCC
TCCGAAATCA GCGCCGATCG CGTCGAAGAT GCACGTAACG TGCTCAGCGA AGGCGACAGC
GTCGAAGCCA AGATCGTCGG CGTCGATCGC AAGAACCGTG CGATCAACCT CTCGGTCAAG
GCGAAGGATC AGACGGATAC CCGTCGTGCC ATGGGCAAAC TGCGCGACCA GGAAGCTGAG
CCGCAGTCCG GTCCGACCAC CATCGGTGAT CTGATCAAGC AGCAGATGGG CGGCGAATAA
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| Protein sequence | MSESFAELFE QSLQDINMEP GAIVMATVVD IEGDWITVNA GLKSEGQIPA AQFRDDNGEL
TIAVGDEVKV ALEAVEDGFG ETRLSREKAK RAEAWKELEA AFEKDEIVKG VINGKVKGGF
TVDVSSIRAF LPGSLVDVRP VRDTAHLEHK ELDFKVIKLD PKRNNVVVSR RAVLEAENSA
EREALLATLQ EGQQINGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRIKH PSEIVAVGDE
VNVKVLKFDR ERNRVSLGLK QLGEDPWVNI KDRYPENTRV NARVTNLTDY GCFAELEEGV
EGLVHVSEMD WTNKNIHPSK VVQVGDDVEV MVLDIDEERR RISLGIKQCT TNPWEDFSAR
YNKGDRVAGT IKSITDFGIF IGLEGGIDGL VHLSDISWSE PGEEAVRKFK KGDEAEAVIL
SIDPERERIS LGIKQLETDP VSEYLAVNDK GSVVTGRVVE VDAKEAHVEL ATDVVAVLKA
SEISADRVED ARNVLSEGDS VEAKIVGVDR KNRAINLSVK AKDQTDTRRA MGKLRDQEAE
PQSGPTTIGD LIKQQMGGE
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