Gene Csal_2155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2155 
Symbol 
ID4026649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2424824 
End bp2425534 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content67% 
IMG OID637967360 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_574205 
Protein GI92114277 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0463695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCCGG ACCTCGATAC GCCGCTGATC ATCGCACTCG ATTACCCACG CCTCGATCAG 
GCACTCGCTA TGGCCGAGCG CCTGGACCCA TCGCGGTGTC GCGTGAAGGT CGGCAAGGAA
CTGTTCACCC GCACCGGGCC CCGGGTTCTG GAGGCCTTGC ACGGGCTGGG GTTCGAGGTC
TTTCTGGATC TCAAGTTTCA CGATATTCCC AATACGGTGG CCGGCGCCGT CGAGGCCGCT
GCCGATCACG GCGTATGGAT GGTCAACGTG CATGCCGGCG GCGGGCGCCG AATGATGGAG
GCGGCCCGGG AGCGACTGGA ACGTCGTCGG CTCGGTACCC ATCTGATCGC GGTCACGGTG
TTGACCAGCA TGGAACGTGA TGACCTGATC GAAGTGGGCG TCGAGGCCGA GCCGCTGTCA
CAGGTCGAGC GTTTGGCGAG GTTGGCGCAG CAGAGCGGCA TGGCAGGCGT GGTGTGTTCC
GCGCAGGAAG CGGCGGCGTT GCGTGCTACG TGCGGCGACG ACTTCCTGAA GGTCACGCCC
GGCATCCGGC CGCGTGCGTC GAGTGCCGAC GACCAGCGCC GCACCCTGAC CCCGGGCGAG
GCGATGGCGG CCGGCAGTAC GCATCTGGTG GTGGGACGCC CGGTCACGCA GGCGCCGGAT
CCGATGGCGG CGCTGGCGAC CATCGAACGC GAGCTTGCGG AGCCGTCGTA A
 
Protein sequence
MSPDLDTPLI IALDYPRLDQ ALAMAERLDP SRCRVKVGKE LFTRTGPRVL EALHGLGFEV 
FLDLKFHDIP NTVAGAVEAA ADHGVWMVNV HAGGGRRMME AARERLERRR LGTHLIAVTV
LTSMERDDLI EVGVEAEPLS QVERLARLAQ QSGMAGVVCS AQEAAALRAT CGDDFLKVTP
GIRPRASSAD DQRRTLTPGE AMAAGSTHLV VGRPVTQAPD PMAALATIER ELAEPS