| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2140 |
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| Symbol | |
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| ID | 4026480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 2408710 |
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| End bp | 2410791 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637967345 |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_574190 |
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| Protein GI | 92114262 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCATG ACGGTTTCCC TCTTCCCCGA CCACGACCGG TGTCACGCAT GATTTCCGAC
ATCGTCCGTC GGTTGCACCA TTTGCGTAGC GAGCATCGAC GCAATATCGC GCTCTTCTGC
GCCCTGGTGG CGGGCAGCGG GCTGGCCGTG CTCATGTCGC TGTTTTTCGA TGGCAGCATG
ACGGGGCTGC TCATCGTGAT CGGCGGCGTG ATCCTGCTGG CGACATTGCT CCTGCGGCGC
ATGGCCCGCC AGACGCGGGA CAGCATTCGC CAGTGGCAAG CCTTGCTGAA CGCCCAGCAG
CGCCAGGCGG ATCAGCAGGA AGCCTGGCGC CGCATGCGCG AGCTTCTGCA ACGCGATCTG
GACGAGGATG CCTTCCTGCG GGCCTTGCTC GATACCACTG CCGAAGTGCT CGGCGTCGAG
CGTGCCGGCC TGTGGTTCCT CGACGAAGAC CGCGCCCTGA CCTGTCGCAT GTCCCTCATC
GACTCACTCA ATGGCTTGCG ACTGCCCCCC AACGGGCTGG ATGGCTATCT TGCATCGCTG
ACATACAACC CTTGTCTGGT CACCTCCGAC GCCCAGCACG ACGAACGGCT AGCCGGCCTG
CGCGACTACC TTCGGGACAA TCGCATTCAG GCCATGCTGG ACGTCGGCAT TTTCGTCGGC
GGCGAGCTGC GCGGCGCGAT TTGCTGCGAA TCGACGCATC CGCGTGAATG GCAGGGTGAT
GAAATCACCA GTCTGATGGG CTTCGCGGGA TTGTTGTCGC AATTTTCCGA ATCCCTGCGC
CGGCGGGAGG TCGAACACGA CCTGTATCGT CAGCTGCACC ATGACGAAGT CTCCGACCTG
GCGACGTTGA AGGGGTTGCT CGAGCGTCTT CACGCCCTGA TCCGGAGCCA TGGTTCCTTC
CATCTGCTGG TGGTACGCCT CGGCGGACTC AGTCATATCA ACGAGACCCT GGGGCAGCAG
GCCGGGGACG AAGCGATTCG TCAGGTGGCG GCCAAGCTCA AGGAGCGCCT GACCGAGCTG
CAAGGCGAGA TCCTCATCGG GCGTCTTCCG GCCAACCGGC TGTTGATCAC GATTCCCGGC
CAGACCGACG ACTCGTTGCG CCGCTACTGC CTGCAACGGC TGCTGACCCT CGGGGATGGC
ACCTGGCGCG TCTTCGGCAC TCCCTGCCAG TTGCGCTTCA ACATCGGCGT GACGCGTTAC
CCCTACGACG CCAGCGACAT CGAATCCCTG CTGCAACGTG CCGAACTCGC CGTACAGCAT
GCCCGCGAAA CCCTGCCTCA CCATCTGGCC TTCTACACCA GCCAGCTGAG TGACTGGGAG
CATCGCCTGA GCCGTCTGGA ACGCGAGCTG CGTACGGCGC TCGACGCGCA GCAACTGCGT
CTTTACCTGC AGGGACAATT CGATACCTCG GGCCGGCTGG CCGGCGCCGA GGTGCTGCTG
CGCTGGCAGC ACCCGCGCGA AGGCCTGCTG GCGCCCGGCA GCTTCATCGC CGAAGCCGAG
CACAGCGGGC TGATCCGCCC CATGGGGCAA TGGGTCCTCG AACAAGCTTG CGCCCTGCTC
GGCGGCGTGC TGCGCGACAG CGACCTGACC CTCTCGGTCA ACGTCTCGGT GCAGCAGCTG
CATGACGATG CGTTCATCAC GACCCTGACG CACCTGCTCG ACCGGCATGG GTTCGCGCCT
CACCGGCTGA TCCTGGAGGT CGTCGAGTCC CTGCTGGTGA CGCCGGGCGT CGCCAGCCGG
CTCAACGCAC TGCGGGCACT GGGCATTCGT CTTGCCCTGG ACGACTTCGG CACCGGCTAC
TCGTCGCTGC GCTATCTGCA GGATTTCCAG GTCGACGAGA TCAAGATCGA CAAGATCTTC
GTCGACGCCA TCAAGGAACG CCAGGACGCG CCCCTGGTAC GCTCGATCAT CGCGCTTGGC
AAGGCTCTGG AGCTGCGCGT GGTGGCCGAA GGCATCGAGA GCGCATTTCA ACAGGACTAT
CTGGTCACCA ACGGCGTCGA TTTCCTGCAG GGGTATTACC TGGCGCGTCC CGAACCGGTA
GACGCCTTCC TGCGTCGCCT GGACGCGCCA TCGAGGCGAT GA
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| Protein sequence | MAHDGFPLPR PRPVSRMISD IVRRLHHLRS EHRRNIALFC ALVAGSGLAV LMSLFFDGSM
TGLLIVIGGV ILLATLLLRR MARQTRDSIR QWQALLNAQQ RQADQQEAWR RMRELLQRDL
DEDAFLRALL DTTAEVLGVE RAGLWFLDED RALTCRMSLI DSLNGLRLPP NGLDGYLASL
TYNPCLVTSD AQHDERLAGL RDYLRDNRIQ AMLDVGIFVG GELRGAICCE STHPREWQGD
EITSLMGFAG LLSQFSESLR RREVEHDLYR QLHHDEVSDL ATLKGLLERL HALIRSHGSF
HLLVVRLGGL SHINETLGQQ AGDEAIRQVA AKLKERLTEL QGEILIGRLP ANRLLITIPG
QTDDSLRRYC LQRLLTLGDG TWRVFGTPCQ LRFNIGVTRY PYDASDIESL LQRAELAVQH
ARETLPHHLA FYTSQLSDWE HRLSRLEREL RTALDAQQLR LYLQGQFDTS GRLAGAEVLL
RWQHPREGLL APGSFIAEAE HSGLIRPMGQ WVLEQACALL GGVLRDSDLT LSVNVSVQQL
HDDAFITTLT HLLDRHGFAP HRLILEVVES LLVTPGVASR LNALRALGIR LALDDFGTGY
SSLRYLQDFQ VDEIKIDKIF VDAIKERQDA PLVRSIIALG KALELRVVAE GIESAFQQDY
LVTNGVDFLQ GYYLARPEPV DAFLRRLDAP SRR
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