Gene Csal_2133 details

Gene Information

• Locus tag: Csal_2133
• Symbol: uvrC
• ID: 4026470
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: +
• Start bp: 2400940
• End bp: 2402754
• Gene Length: 1815 bp
• Protein Length: 604 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637967335
• Product: excinuclease ABC subunit C
• Protein accession: YP_574183
• Protein GI: 92114255
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00985622
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCTTCG ATGCCAAGCA CTTCCTCAAG ACGGTTTCCG AGTCACCCGG CGTGTATCGC 
ATGCTGGATG CCGAAGGCAA CGTGCTGTAC GTCGGCAAGG CCAAACGGCT GAAGGCCCGC 
CTCGCCAGCT ACTTCCGTGG TGCGCTGAAT GCCAAGACCC AGGCCCTGGT CAGCCGGATC 
GAGGACATCC AGGTCACCAT CACGCGGACC GAGACAGAGG CCCTGCTGCT CGAGCAGACG 
CTCATCAAGG AACAGCGTCC GCCGTACAAC ATCCTCCTGC GTGACGATAA ATCGTACCCG 
TTCATCTTCG TCTCGGATCG GCACCCCTAC CCCGCCCTCG AATTCAAGCG CGCGCGGCAG 
AAACGTGGCG ACGGCCGTTA CCTGGGGCCG TTTCCGAGTA CCACCGCGGT GCGTGAAAGC 
CTGTCGTTGA TGCAGAAGAT CTTTCGCATC CGCAACTGCG AGGACAGTGT CTTCGCGCAC 
CGCACCCGGC CCTGCCTGCA ATATCAAATT CAGCGCTGCA GCGCTCCCTG TGTCGACTAC 
ATCGGTCGCG AGGAATACCA GCGCGATATC GACCACGCCA TCATGTGCCT GGAAGGGCGT 
AGCGAGCAGG TCACCGCGCA ACTGACCCGC GACATGGAAA CCGCCAGTCA GGCGCTGGAT 
TTCGAGGAAG CCGCGCGCCT GCGCGACCAG ATCCAGCAAC TTCGCCGCCT GCAGGAACGC 
CAAATCGTCG ATACTGGGGA CGGCGATGCC GACATCTTCG CTCTGGCCGA GCGCCCCGGC 
GGCCTCTGCA TCAGCGCACT GGCCGTGCGT GGCGGCCGCA TGCTCGGCGC TCGCCACCAT 
ATGCCGCAGA ACGGCCTGGA CCTCACGGCG GAGGCGCTTC TCGGCGAGTT CATCAGCCAT 
TACTATCTGG GACATGAGCG CGAGATTCCC GCGGAAGTCA TCACGGCTCT GCCCCTGGCG 
GACAGCGACG TCATTCAAGC CGCCCTCTCC GAGCGTGCCG GCAAGCGGAT TCGCCTGGCC 
CATCAGGTTC GCGGCCACCG AGCCCAATGG CTACGCCTGG CGGAAACCAA TGCCGAGCAA 
CACCTCACCA CGCAACTGGC CAATCGTTCG CAGCTGGCCA AGCGTTTCGC CTCCCTGCGT 
GACGCCATGC AGCTGCAGGA GACACCGACA CGCCTGGAAT GCTTCGACAT CAGCCATAGC 
CATGGCGAAG CGACGGTCGC CTCCTGCGTG GTGTTCGACC AGGACGGGCC GGTCAAATCC 
GATTACCGAC GTTTCAACAT CGAGGGCGTG GCAGCGGGGG ACGACTACGC GGCCATGCGG 
CAAGCCCTGA CTCGACGCTA CAAACGCTTG ACTCAGGACG ACAGCAAGCT TCCCGGCATC 
CTGATCGTCG ATGGCGGCAA GGGACAGCTC AACATGGCAC GCGAGGTGCT CGAGGACGTC 
GGCATCACCG GAACGCATCT GCTCGGCGTG GCCAAGGGCA CGACACGCAA GCCCGGACTC 
GAGACGCTGT TTCTGGAAAC CGTCGACAAC AGTCTGGCAC TGGACAGCGC ATCGCCGGGG 
CTGCACCTCA TTCAGCATAT TCGCGACGAA GCCCACCGTT TCGCGATCAC CGGTCATCGT 
CAGCAACGCG ACAAGCAACG CCGTACTTCG ACCCTGCAGG ACATTCCCGG GATCGGGCCC 
AAGCGTCGCC GGGAGTTGCT GCGCTTCTTC GGTGGGCTCC AGGGCGTGCG CCAGGCCAGT 
CGCGACGAGC TGGCGCGTGT GCCCGGCATC AGCGCCCAAA TGGCCACGAC CATCCATCAA 
GCCTTGCATG GATGA 

 

Protein sequence

MSFDAKHFLK TVSESPGVYR MLDAEGNVLY VGKAKRLKAR LASYFRGALN AKTQALVSRI 
EDIQVTITRT ETEALLLEQT LIKEQRPPYN ILLRDDKSYP FIFVSDRHPY PALEFKRARQ 
KRGDGRYLGP FPSTTAVRES LSLMQKIFRI RNCEDSVFAH RTRPCLQYQI QRCSAPCVDY 
IGREEYQRDI DHAIMCLEGR SEQVTAQLTR DMETASQALD FEEAARLRDQ IQQLRRLQER 
QIVDTGDGDA DIFALAERPG GLCISALAVR GGRMLGARHH MPQNGLDLTA EALLGEFISH 
YYLGHEREIP AEVITALPLA DSDVIQAALS ERAGKRIRLA HQVRGHRAQW LRLAETNAEQ 
HLTTQLANRS QLAKRFASLR DAMQLQETPT RLECFDISHS HGEATVASCV VFDQDGPVKS 
DYRRFNIEGV AAGDDYAAMR QALTRRYKRL TQDDSKLPGI LIVDGGKGQL NMAREVLEDV 
GITGTHLLGV AKGTTRKPGL ETLFLETVDN SLALDSASPG LHLIQHIRDE AHRFAITGHR 
QQRDKQRRTS TLQDIPGIGP KRRRELLRFF GGLQGVRQAS RDELARVPGI SAQMATTIHQ 
ALHG