Gene Csal_2120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2120 
Symbol 
ID4029265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2388920 
End bp2390965 
Gene Length2046 bp 
Protein Length681 aa 
Translation table11 
GC content64% 
IMG OID637967321 
Productmethionyl-tRNA synthetase 
Protein accessionYP_574170 
Protein GI92114242 
COG category[J] Translation, ribosomal structure and biogenesis
[R] General function prediction only 
COG ID[COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase 
TIGRFAM ID[TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACTA CCGCCAACGC CAAGCGCAAG ATCCTGGTCA CCAGTGCCCT GCCTTATGCC 
AACGGCTCGA TCCATCTGGG CCACCTGCTC GAGTACATCC AGACCGATAT CTGGGTGCGC
TTCCAGAAGA GCCGCGGCCA CGAGTGTCAT TACGTGTGTG CGGATGACGC CCATGGCACC
GCGATCATGC TGCGCGCGGA GCAAGAAGGC ATCACTCCGG AACAACTGAT CAGCAAGGTC
AGCGCCGAAC ACCAGGCCGA CTTCGCCCGC TTCGGGGTGG CATTCGACAA TTACTATTCC
ACCCACTCGG AAGAGAACCG TCAGCACAGC GAGCGCATCT ACACGGCGCT GCGTGACGCC
GGCCATATCT CGACGCGTGA CATCGAGCAG ATGTACGACC CGGTGAAGGG CCTGTTCCTC
GCCGACCGTT TCATCAAGGG CACCTGCCCC AAATGCGGGG CGGGCGATCA GTACGGCGAC
AATTGCGAGG CGTGCGGAGC CACCTATACG CCGGCCGAGC TGATCGATCC GGTCTCGGCG
ATCAGCGGTG CCACGCCCGA GGTGCGCAGC TCGACGCACT TCTTCTTCAA GCTGCCCGAC
TTCGCCGACT TCATGCAGGG CTGGATCGAC GGCGGCCACG TCCAGCCGCA GATCCGCAAC
AAGTTGCTCG AATGGTTCGA ATCGGGCTTC AACGAGTGGG ACATCTCGCG CGACGCCCCC
TATTTCGGCT TCGAGATCCC CGACGCGCCG GGCAAGTATT TCTATGTCTG GCTGGACGCG
CCGATCGGCT ACCTGGCCAG CTTCCAGAAC CTCTGCGAGC GTGAGGGCAT CGACTTCGAC
AGCTACTGGC GCCGCGACTC GGACGCGGAG GTCTATCACT TCATCGGCAA GGACATCGTC
TACTTCCACG CCCTGTTCTG GCCGGCCATG CTCGAGGGCG CTGGGCTGCG CACGCCGACC
GGCGTCAACT GCCACGGCTT CGTCACCGTC AACGGCGCCA AGATGTCCAA GTCCCGCGGG
ACCTTCATCA AGGCGCAGAC CTATGCCGAA TATCTCAACC CCGAGTACCT GCGCTACTAC
TTCGCCGCCA AGCTCACCGC CGGCGTCGAC GATCTGGACC TCAACCTCGA GGACTTCGCC
TCGCGCGTGA ACGCGGATCT GGTCGGCAAG GTCGTCAACA TCGCCAGTCG CTGTGCCGGC
TTCGTCAAGA AGCTGGGTGC CGGCCGACTC GCCGCGCACT GTGCCGAGCC CGAGCTGGTG
ACCCGCTTCG TGGAGGCCGG CGAGGCCATC GCCGCCGATT ACGAGGCGCG CGAATTCGCC
CGCGCCATGC GCAAGGTCAT GGACCTGGCC GACGAAGCCA ATGCCTACAT CGCCGACAAG
GCGCCCTGGG TGCTGGCCAA GGAAGAAGGC CGCGAGCAGG AGGTGCTCGA CATCTGCTCG
GTGGGCATCA ACCTGTTCCG CATCCTGATG GTCTACCTGC AGCCCGTGGT GCCGGCGATG
GCCGAGCAGG CACGCGACTT CCTGCAGATC GAGTCGCTCG ACTGGGAAAG CCGCCGCACC
TTGCTCGAGG ACCACGCGAT CGCCAAGTTC AAGCCGCTGA TGACACGTGT CGATACCGAC
AAGATCGCGT CGATGACCGA GGCGTCCAAG GAAGTCCTCG CCGAAGAGCA GAAGCTCAAG
GAACAGGCCA AGGGCCCCCT CGCCGACGAT CCGATCGCCG ACGAGATCGG CTTCGACGAT
TTTGCCAAGC TCGACCTGCG CATCGTGCGC ATCGCCAAGG CCGAATACGT CGAGGGCGCC
AAGAAGCTCC TCAAGCTGAC GCTCGACCTG GGCGGCGAAA CGCGGACGGT CTTCTCGGGC
ATTCGCGCCG TCTATGCGCC CGAGGCGCTG GAAGGCCGCC TGACCGTCAT GGTCGCCAAT
CTGGCACCGC GCAAGATGCG TTTCGGCGTT TCGGAAGGCA TGGTGCTGGC CGCCGGCGAC
AAGGAGGGCG GCATCTATCT GCTGTCACCG GACAACGGGG CGGAGCCCGG CCAGCGGGTG
TCCTGA
 
Protein sequence
MPTTANAKRK ILVTSALPYA NGSIHLGHLL EYIQTDIWVR FQKSRGHECH YVCADDAHGT 
AIMLRAEQEG ITPEQLISKV SAEHQADFAR FGVAFDNYYS THSEENRQHS ERIYTALRDA
GHISTRDIEQ MYDPVKGLFL ADRFIKGTCP KCGAGDQYGD NCEACGATYT PAELIDPVSA
ISGATPEVRS STHFFFKLPD FADFMQGWID GGHVQPQIRN KLLEWFESGF NEWDISRDAP
YFGFEIPDAP GKYFYVWLDA PIGYLASFQN LCEREGIDFD SYWRRDSDAE VYHFIGKDIV
YFHALFWPAM LEGAGLRTPT GVNCHGFVTV NGAKMSKSRG TFIKAQTYAE YLNPEYLRYY
FAAKLTAGVD DLDLNLEDFA SRVNADLVGK VVNIASRCAG FVKKLGAGRL AAHCAEPELV
TRFVEAGEAI AADYEAREFA RAMRKVMDLA DEANAYIADK APWVLAKEEG REQEVLDICS
VGINLFRILM VYLQPVVPAM AEQARDFLQI ESLDWESRRT LLEDHAIAKF KPLMTRVDTD
KIASMTEASK EVLAEEQKLK EQAKGPLADD PIADEIGFDD FAKLDLRIVR IAKAEYVEGA
KKLLKLTLDL GGETRTVFSG IRAVYAPEAL EGRLTVMVAN LAPRKMRFGV SEGMVLAAGD
KEGGIYLLSP DNGAEPGQRV S