Gene Csal_2105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2105 
Symbol 
ID4029250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2374111 
End bp2374881 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content61% 
IMG OID637967306 
ProductDeoR family transcriptional regulator 
Protein accessionYP_574155 
Protein GI92114227 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAC AAGACCGCCA TGACGCCATC GTCACCCTCG TCAAACGCCA GGGATACGCG 
TCCATCGAGC AATTGACACG GCATTTTTCC GTCACCCCGC AGACGATTCG CCGCGACCTC
AATCAACTGG CGGACGAAGG CGCCATCAAG CGCGTGCACG GCGGCGCAGG GCTGGAATCG
AGCACCGTCA ACACCGCCTA CCATACACGC AAGACCCTCA ACGCCGATGC CAAGCAACGC
ATTGCCGAAT GTGTCGCTGC CCAGATTCCC GACCGCGCCT CGTTGTTCAT CAACATCGGC
ACCAGCAACG AGATGGTCGC CGAAGCCCTG CGCGGCCACC AGGGGCTGGA GGTCATCACC
AACAACCTCA ACGTCGCGGC CATCCTGCAG CACAAGGAAG ACTTCAACGT CATCATTGCC
GGGGGACAGG TGCGCTCGCG AGATGGCGGC ATCATCGGCG AGGCGACGAT CGACTTCATC
AACCAGTTCA AGGTCGATTA CGGCATCATC GGCATCAGCG GCATCGACGA CGATGGCTCA
CTGCTCGAGT TCGACTATCA GGAGGTGCGT GTCGCTCAAG CCATCATCCG CAACTCGCGC
CAGGTGTTCC TGACCGCCGA TCACTCCAAG TTCCACCGCA ACGCCGTGGT CCGCCAGGGC
AACATTGCGC AAATCGACGC GCTATTCACG GACCGCCACC CCCCGGAAGG CATCCAGCGC
CTGCTGCGCG AGCATGACGT GACCCTCCAC CTGGCCGATA CCCCTTCCTG A
 
Protein sequence
MTQQDRHDAI VTLVKRQGYA SIEQLTRHFS VTPQTIRRDL NQLADEGAIK RVHGGAGLES 
STVNTAYHTR KTLNADAKQR IAECVAAQIP DRASLFINIG TSNEMVAEAL RGHQGLEVIT
NNLNVAAILQ HKEDFNVIIA GGQVRSRDGG IIGEATIDFI NQFKVDYGII GISGIDDDGS
LLEFDYQEVR VAQAIIRNSR QVFLTADHSK FHRNAVVRQG NIAQIDALFT DRHPPEGIQR
LLREHDVTLH LADTPS