Gene Csal_2087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2087 
Symbol 
ID4026549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2356291 
End bp2356878 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content61% 
IMG OID637967286 
ProductXRE family transcriptional regulator 
Protein accessionYP_574137 
Protein GI92114209 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG0662] Mannose-6-phosphate isomerase
[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGGAT TCGACGTCGG TGCACGTCTC AAGCAGTTGC GCAAGTTGCG TGACCTGTCG 
CAACGCGAGT TGGCCAAACG CGCCGGCGTG ACCAACAGCA CCATCTCTCT CATCGAACAG
AACAACGTCA GCCCCTCGGT CAGTTCGCTG AAGAAGATTC TCGATGCCAT GCCGGTCTCG
ATCAGCGAGT TTTTTGCCGG CGAGGAGACC AGCCCGCAAG AAAAATTCTT CTATCGTGCC
GAGGAGCTCA CCGAGATCGG CGACGGCAAT CTTTCCTGGC GCCTGGTGGC GGCGCGTCAT
CCCAGTCGAG GCATGTCGAT CATCCACGAA CATTACCCGC CCGGTGCCGA TACCGGCGAG
GAAATGCTCG AGCACGAAGG GGAAGAAGGC GGCGTCGTCA TCGCCGGCAG TATCGAACTC
ACCGTGAACG GCGATACGCA ATGCCTGCAT GCGGGCGATG CTTACTATTT CGACTCCCGC
CTGCCCCACC GCTTCCGCAA CCCCGGCGAT GGCGACTGCG TCATCGTCAG TGCCAACACG
CCGCCGGGAT TCTCGGAGGG CGGCGCCAGC ACGCACCATC GCCGTTGA
 
Protein sequence
MSGFDVGARL KQLRKLRDLS QRELAKRAGV TNSTISLIEQ NNVSPSVSSL KKILDAMPVS 
ISEFFAGEET SPQEKFFYRA EELTEIGDGN LSWRLVAARH PSRGMSIIHE HYPPGADTGE
EMLEHEGEEG GVVIAGSIEL TVNGDTQCLH AGDAYYFDSR LPHRFRNPGD GDCVIVSANT
PPGFSEGGAS THHRR