Gene Csal_2070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2070 
Symbol 
ID4026532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2339522 
End bp2340160 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content67% 
IMG OID637967269 
ProductSOS-response transcriptional repressor, LexA 
Protein accessionYP_574120 
Protein GI92114192 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.189271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCGCT CGCTAACCTC GCGCCAACAA CACGTCTTCG ATTTCATCGT CAAGACCATG 
AACGAGCTCG GCTATCCGCC GACCCGCGCC GAGATCGCCC GCGCACTGGG CTTTCGTTCG
CCCAACGCCG CCGAGGAGCA TCTCCGAGCG CTCGATCGCA AGGGCGTGAT CCGCATGATC
CCCGGCACCT CGCGCGGCAT CCGGCTGACC GGCGAGGAGG ACGCCGCAGC GACGAGCACC
GACGGCCTGC CCGTGGTCGG CGAAGTGGCC GCGGGCAGTC CGATTCTCGC GGCGGCGCAC
ATCGATCGCC ACTGCCCGCT CGCACCGGAT TATTTCACGC CGCGTGCCGA TTACCTGCTG
CGGGTGCGCG GGCTGTCGAT GAAGGATGCC GGCATTCTCG ACGGCGATTT GCTGGCCGTG
CATCGCACGC AGCAGATTCG CGACGGGCAG ATCGTCGTGG CCCGCCTCGA CGACGAGGTG
ACCGTCAAGC GCTTCAAGCG CCAGGGACAT CACGTCTGGC TAGTGGCCGA GAACGCCGAC
TTTGCCCCCA TCGAAGTCGA CCTGCGTCAC CAGGACCTGG AAATCGAAGG ACTGGGCGTG
GGGGTGATTC GCGGCGGCGG CGGCAACGGC CTGCACTGA
 
Protein sequence
MSRSLTSRQQ HVFDFIVKTM NELGYPPTRA EIARALGFRS PNAAEEHLRA LDRKGVIRMI 
PGTSRGIRLT GEEDAAATST DGLPVVGEVA AGSPILAAAH IDRHCPLAPD YFTPRADYLL
RVRGLSMKDA GILDGDLLAV HRTQQIRDGQ IVVARLDDEV TVKRFKRQGH HVWLVAENAD
FAPIEVDLRH QDLEIEGLGV GVIRGGGGNG LH