| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2010 |
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| Symbol | |
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| ID | 4027094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 2270477 |
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| End bp | 2272201 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637967205 |
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| Product | diguanylate cyclase with PAS/PAC and GAF sensors |
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| Protein accession | YP_574060 |
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| Protein GI | 92114132 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCCGCT CACGGATGCC GGAAGCCGAA GCCCAGGAAG CCGAGCGCGT CGCCGCGCTG
CATCGGCTGG GCATCTACGA AACGTCCTGC GATCCGGAGC TGAACCGGCT CATGACCATG
ATCGGGGAAC TCTTCGACGT TCCCTGCGCC ATGATCAATC TCGTCGACCG GGAACGGACC
TGGTGCCTGG CGAGTTCCAG CGACCTCGCC GCGCCGCCGC GTCGCGAGGA TTCGCTCTGT
GCCTTCACGG TGGATCATGA TACGGCGTTG TTCATCGAGG ACATGCGCGA TGCCGATGGA
TTTCGCGAAC ACCCGCTGGT GAGGGACACG CCTTTCATCC GCGCCTTCGC CGGCGAAAGA
ATCCTGTCGT TGAGCGGCCA TCTGCTGGGC ACGCTGTGCC TGGTCGATAT CCGCCCACGG
GTTTTCGACG CCGAGAGCCG GCAACGCCTG GCCGACCTGG CCAAGCTCGT CTCGCTGCGC
CTCAACCAGC GCCTGATCGA CGAGCAGCGC CATACCGCCG ATGCGATGAT CGATCAGCAG
ACCCAGCTGC TCGACCATCT ACCGGACGGG ATCGTGCTGC TCGACGACCG CCGCGTCGTG
CATTACGCCA ACGCCGCCGC CCAGCGCCTG CTGGGCGGCG CCTCTCATGA CGTCAAGGGC
TGTGCCTTCG ACACCCTCGT CGCACAGCCC GAAGGGCACG ATTTCGCCAC GGCGTCACGC
ACCGGCTCGC CACTCGAGAT CCATGCACTG CCCAGGTTCC AGGGGTTCGA GGCCTTGCAG
CTGGGCGACC GCGCCTCGCT CGTGGGCACG CACCAAGCCC TGCAACGCTT GCGCAGTCTG
GTGGATGCCT GGCCCGATGG CGTACTGATC TGCGATTACG ACAACCTGCG CATCGTCGAG
TGGAACATCG CCGCACGCCG TTTGCTAGGC ACGCAGGCAT CATCGCTCGA AGGCACTCGT
CTTCCCCAGT GGTTCCTGTC GGGCGACCGG CGCACGCTGC AGCGGCGCAT CCGTGCGGAG
CTCGGTGAAG GGGATGGCAC CCTGCGCCAT AACGCCACCT TGCACAACGA CACTCCGGTC
GAAGTCACGC TGGTGCCGAT GCAGGACGCC AGCGAGACAT CGTTGATCGT CGTCCTGCGC
GACCGCAGTC CTTATCTTCA GCACCTGCGC ACGGTCACGC GCAAGCTTGC CAAGGCCGAG
GAAATGATCA GCCAGGATGC CCTGACCGGC CTGCTCAACC GCTTCGGTTT CAAGCAGGCC
ATCGACGAGT TCATGGTCGA GGCCGAGCGC GGCGTCCCCT TCGCGCTGCT CATCGCCGAT
ATCGATCATT TCAAGGATAT CAACGATACC TATGGCCACC AGCTAGGCGA CGAGGCGCTC
AAGATCGTCG CCAGCCGGCT TGCCGAGCAG CTTCGTGATG GCGATGCCGT GGCACGTTAT
GGCGGCGAGG AATTCTGCAT GCTGATGACG GTTCCCGAGG ACCGGGTCGT GGAAGTGGCC
GAGCGAATCC GGCGGACCGT CGCCGCCACG CCCGTGACAC TCGATGACGG CAAGGAACTC
GCGCTCACGA TTAGTATCGG CGCGACGTAC CATACCCCCG GCCTGGACGA GGACAGCATG
TTCGAACGCG CCGACGAAGC GCTCTATGAA GCCAAGGAGT ACGGACGCAA CCGTACCGTC
ATGCTAAACG CCGCAACGCC CAGGGCGCGT GACGAAGAAG AGTGA
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| Protein sequence | MCRSRMPEAE AQEAERVAAL HRLGIYETSC DPELNRLMTM IGELFDVPCA MINLVDRERT
WCLASSSDLA APPRREDSLC AFTVDHDTAL FIEDMRDADG FREHPLVRDT PFIRAFAGER
ILSLSGHLLG TLCLVDIRPR VFDAESRQRL ADLAKLVSLR LNQRLIDEQR HTADAMIDQQ
TQLLDHLPDG IVLLDDRRVV HYANAAAQRL LGGASHDVKG CAFDTLVAQP EGHDFATASR
TGSPLEIHAL PRFQGFEALQ LGDRASLVGT HQALQRLRSL VDAWPDGVLI CDYDNLRIVE
WNIAARRLLG TQASSLEGTR LPQWFLSGDR RTLQRRIRAE LGEGDGTLRH NATLHNDTPV
EVTLVPMQDA SETSLIVVLR DRSPYLQHLR TVTRKLAKAE EMISQDALTG LLNRFGFKQA
IDEFMVEAER GVPFALLIAD IDHFKDINDT YGHQLGDEAL KIVASRLAEQ LRDGDAVARY
GGEEFCMLMT VPEDRVVEVA ERIRRTVAAT PVTLDDGKEL ALTISIGATY HTPGLDEDSM
FERADEALYE AKEYGRNRTV MLNAATPRAR DEEE
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