Gene Csal_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2006 
Symbol 
ID4027090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand- 
Start bp2265334 
End bp2266308 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content65% 
IMG OID637967201 
ProductK+-dependent Na+/Ca+ exchanger related-protein 
Protein accessionYP_574056 
Protein GI92114128 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID[TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTAATGG CGATCATCGC CGTCGCTCTC GGGCTGGCGG TACTGGTATG GAGTGCCGAC 
CGCTTCGTCG ACGGTGCGGC CGCGACGTCG CGCCATCTTG GATTGCCGCC CCTGCTGATC 
GGCATGGTGG TCATCGGGTT CGGTACCTCG GCCCCGGAAC TGATGGTATC GGCGCTTTCC 
GCCTGGCAAG GCAACCCCGG CCTGGCGCTG GGTAACGCCT ACGGCTCCAA CATCGCCAAT 
ATCGGCCTGA TCGTCGGCTT CGTGGCCCTG CTCAGTCCGT TGACCATGCA CTCGCAAGTG 
CTGCGTCAAG AGTTGCCGCT GCTCATGCTG GTGACCCTGG CATCGCTCTG GTGCCTTCAG 
GACGGCGCCG TGTCGCGCTG GGACGCGGTA CTGCTGTTGG CAATGCTGGC AGCCTTCTTG 
ACCTACAGCA TCATACGCGG CCGGCAGCAG GGCAGTGACA CGCTCGCCGA CAACACCACG 
GCCGACCTCG ATATCCAGGC GATGACGCTC AAGCGGGCGA TCACCTGGAC CCTGGTGGGC 
CTGGTCTTGC TGATCGTCAG CTCACGTCTG CTGGTCTGGG GGGCGGTGGA TATCGCCTCG 
GCATTCGGGG TCAGCGATCT GGTCATCGGG TTGACGGTGG TCGCCATCGG CACGTCGCTG 
CCGGAACTGG CTTCCTCGAT CAGTGCGGTT CGCAAGAACG AGCACGACCT CGTCCTCGGC 
AACGTAGTGG GTTCCAACCT CTTCAATACC CTCGCCGTGG TGGGGCTGGC GGGTGTCATC 
GATCCGATCG ACGTCGACGG CGCAGTCCTG GTGCGGGATT GGCCGGTCAT GGCGGGCTTG 
ACCCTGGCGC TGACCGTGTT CGGCATCGGC TGGAAAGGCC AGGGGCGTAT CAACCGCCTG 
GAGGCTGCTC TGCTGTTGGG CACGTTCATC GCCTATACGG CGTGGCTGGT GATGTCCGTG 
ATCGGCACGC GCTAG
 
Protein sequence
MLMAIIAVAL GLAVLVWSAD RFVDGAAATS RHLGLPPLLI GMVVIGFGTS APELMVSALS 
AWQGNPGLAL GNAYGSNIAN IGLIVGFVAL LSPLTMHSQV LRQELPLLML VTLASLWCLQ 
DGAVSRWDAV LLLAMLAAFL TYSIIRGRQQ GSDTLADNTT ADLDIQAMTL KRAITWTLVG 
LVLLIVSSRL LVWGAVDIAS AFGVSDLVIG LTVVAIGTSL PELASSISAV RKNEHDLVLG 
NVVGSNLFNT LAVVGLAGVI DPIDVDGAVL VRDWPVMAGL TLALTVFGIG WKGQGRINRL 
EAALLLGTFI AYTAWLVMSV IGTR