Gene Csal_2001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2001 
Symbol 
ID4027085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2260391 
End bp2261812 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content64% 
IMG OID637967196 
Productcytochrome bd ubiquinol oxidase, subunit I 
Protein accessionYP_574051 
Protein GI92114123 
COG category[C] Energy production and conversion 
COG ID[COG1271] Cytochrome bd-type quinol oxidase, subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTAG ATCCGATTCT TCTGTCGCGA TTGCAGTTCG CATTCGTGGT TTCCTTTCAT 
GCCATCTTCC CGGTCTTCAC GATCGGGCTT GCCTCTTACA TCGCCGTGCT GCAGGGCCTG
TACGTCACCA CCGGCAATCG TGTCTGGGAC CGCCTCGGGT TGTTCTGGAC CAAGGTGTTT
GCCGTGGTCT TCGGCATGGG GGTGGTGTCG GGCATCGTGA TGGCGTTCCA GTTCGGGACC
AACTGGAGCA ACTTCTCGCA GATGGCCGCG AACTTCATCG GGCCGATGCT GAGTTACGAG
GTCGTCACGG CGTTCTTCCT CGAGGCCGGC TTCCTGGGCG TGCTGCTGTT CGGGCGCCAC
CGGGTCTCGC CGGCGGTGCA TTTCTTCGCG GCACTGATGG TCGCCGTGGG GACCTTCATC
TCGGCCTTCT GGATCCTGGC CACCAACAGC TGGATGCAGA CGCCGCAAGG GTTCGAGATT
CGCGAGGGCG TGATTCACGT CACTTCCTGG GTCGAGGCCA TCTTCAACCC GTCGTTCCCC
TATCGCTTCA CGCACATGGC GCTGGCGGCG TTCTTGACCG GCGGTTTCGT GGTGACCGGC
GTCAGTGCCT GGTTCCTGCT GCGTGGGCGC GATGTCGACG CCCACAAGCG GGCCTTGTCG
ATGACGCTGT GGCTATTGTT GATCCTGGCG CCGCTGCAGG TCTACGTCGG CGACGAACAT
GGGCTCAACA CCCTGGAGCA TCAGCCGGAA AAGATCGCCG CGATGGAAGG CAACTGGGAA
ACCCAGTCGA ACGTGCCGCT GTTGCTGTTC GCATTGCCCG ACCGGGATCT GCAGGCCAAC
CGCTTCGAGA TCGGCATTCC CAACGGCGCC AGTCTCATCC TGCGTCACGA CCCGGACGGC
GTCGTGCCGG GCCTCGACCA GCTCGAGCCC GCGCAGCAGC CGCCGGTATG GATCACCTTC
TTCAGCTTCC GCGTGATGGT GGGGCTGGGG CTTCTGATGA TCGCCTTCGC GGTGGCCGGC
CTGGTGCTGC GCAAGGGCGG ACGCGTCTAC CGCAGCCGCT GGTTCCTGCG CGGTCTGCAG
GGCATGAGCC TGGCTCCGTT CGTGGCGGTG GTCGCGGGGT GGTTCGTGAC CGAAACCGGC
CGTTCGCCGT GGCTGATCTA TGGCGTGCTC GACTACGCCG ATGCCATCAC GCCCTCGTTG
AGCGGCGGCA TGGTGCTGTT CACGCTGCTG GGCTATATCG CCGTCTATGC CGTGATCTTC
TACGCCGGCG TCTATTACCT GTGCAAGGTG ATCCGCCAGG GGCTCGACGA GCGTGACGAG
ACCGACGAGC TGGATAGCCA CGATCGGCCG GCGCGGCCCA TGTCCGCCGC CCACGTTCCC
TTCGACGATG AGCGCGACGA CCGCGCACCG AGCAGGAGTT AA
 
Protein sequence
MALDPILLSR LQFAFVVSFH AIFPVFTIGL ASYIAVLQGL YVTTGNRVWD RLGLFWTKVF 
AVVFGMGVVS GIVMAFQFGT NWSNFSQMAA NFIGPMLSYE VVTAFFLEAG FLGVLLFGRH
RVSPAVHFFA ALMVAVGTFI SAFWILATNS WMQTPQGFEI REGVIHVTSW VEAIFNPSFP
YRFTHMALAA FLTGGFVVTG VSAWFLLRGR DVDAHKRALS MTLWLLLILA PLQVYVGDEH
GLNTLEHQPE KIAAMEGNWE TQSNVPLLLF ALPDRDLQAN RFEIGIPNGA SLILRHDPDG
VVPGLDQLEP AQQPPVWITF FSFRVMVGLG LLMIAFAVAG LVLRKGGRVY RSRWFLRGLQ
GMSLAPFVAV VAGWFVTETG RSPWLIYGVL DYADAITPSL SGGMVLFTLL GYIAVYAVIF
YAGVYYLCKV IRQGLDERDE TDELDSHDRP ARPMSAAHVP FDDERDDRAP SRS