Gene Csal_1997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1997 
Symbol 
ID4027081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand+ 
Start bp2255264 
End bp2255944 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content66% 
IMG OID637967192 
ProductDNA-binding transcriptional regulator CsiR 
Protein accessionYP_574047 
Protein GI92114119 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGCG CCAGTCCGCG CCCCAATCTC GCCATCACTG CCTACCGACA ACTCAAGCGC 
GATATCATTC GCGGCGTCTA CGCGCCCGGC GAAAAACTCC GCATGAGCCA TCTCAAGGAA 
CGCTACGCGC TTGGCGTTGG CCCGATGCGC GAGGCGTTGT CGCAACTGGT CGGGGAGCGC 
CTGGTCACGG CGGTCAGCCA GCGGGGCTAT CGCGTCGCCG AGATGTCGAT CGAAGAGCTC 
GAGTCACTCT ACGATGCCCG TGCGGAACTG GAGGGACTGG TGCTGGAACT GGCCATCGCG 
CGCGGCGGCG ACGACTGGGA AGCCGGTATC GTCGCCAAGG CGCATGCCCT GGCCAAGGTG 
GCCGAGGTAC ACAGTGCCGA GGACATGCTC GATGTGTGGG ACACGCGCCA CCAGGCGTTT 
CATAGCGCCA TCGCGGCCGG CTGCGACTCG CCGCACCTGT TGCAGGCACG CACCTGGTTA 
TTCGATCAGG CCGAGCGCTA TCGTCACCTG TGGCTGTGCC AGACGGTGTT CTCCGCGGAG 
GCACTGGACG CCAAGCGCCG GGAGCACGCC GCACTCACCG ACGCCATTCT CGCCCGCGAC 
ACGCCCACCG CCCGCGCGAT GATGCGCGAA CATCTGATGT CACCGGTGCC GATCATCAAG 
GAGGTCATGC AGCAGCGGTG A
 
Protein sequence
MTSASPRPNL AITAYRQLKR DIIRGVYAPG EKLRMSHLKE RYALGVGPMR EALSQLVGER 
LVTAVSQRGY RVAEMSIEEL ESLYDARAEL EGLVLELAIA RGGDDWEAGI VAKAHALAKV 
AEVHSAEDML DVWDTRHQAF HSAIAAGCDS PHLLQARTWL FDQAERYRHL WLCQTVFSAE 
ALDAKRREHA ALTDAILARD TPTARAMMRE HLMSPVPIIK EVMQQR