Gene Csal_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1980 
Symbol 
ID4027220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2234718 
End bp2235074 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content61% 
IMG OID637967176 
Productanti-sigma-28 factor, FlgM 
Protein accessionYP_574031 
Protein GI92114103 
COG category[K] Transcription
[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2747] Negative regulator of flagellin synthesis (anti-sigma28 factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTACAG TTTTCGCGAG TGTGGCCGAT ACAGGGGTTA AGCCCGCGCT GCAAGAGAGT 
TCAATTTTGA AAATCTCCAA TCTACATCCG CCAACGCAGA CAACTCAGAG TGAGCAAGGG
GACGCCGCCC AGCGCACACG CCGTGGCGAT GACACCGCGC AAGCCAGTTC CCCGGCAAGC
ATCACCACGC TGAGTCAGAG CAACGAAGCC GATACCAGCC AGGATATCGA TGTCGGCCGT
GTCGCCGAGA TTCGCCAGGC CATCAGCGAT GGCCAGCTCG AACTCGACAC CGGCAAGATC
GCCGACGGCT TGATCGACAG CGTCCGCGAC CTGCTGGGCG ATACCGCCGA GCGCTGA
 
Protein sequence
MPTVFASVAD TGVKPALQES SILKISNLHP PTQTTQSEQG DAAQRTRRGD DTAQASSPAS 
ITTLSQSNEA DTSQDIDVGR VAEIRQAISD GQLELDTGKI ADGLIDSVRD LLGDTAER