| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1976 |
|---|
| Symbol | flgD |
|---|
| ID | 4027216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 2232028 |
|---|
| End bp | 2232735 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637967172 |
|---|
| Product | flagellar basal body rod modification protein |
|---|
| Protein accession | YP_574027 |
|---|
| Protein GI | 92114099 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1843] Flagellar hook capping protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGCC CCGTCATCGG CAGTAACACG CTTGCCTCGA TCAATAGTAC GCCCAATGCC
AATGCCTCGA ACGAGACTCG TACCACGGGT GCGGAGTCGT CCGAGGACCT CAACAACCGC
TTCATGACGT TGTTGATCAC CCAGTTGCAG AACCAGGATC CGACGAAGCC GATGGACAAC
TCGGACATGA CGGCGCAACT GGCCCAGATC AATACGGTCA GCGGCATCCA GGAACTCAAC
GACTCGCTGG GTGATATCAA CGAACAGATC GATGCCGGCA AGACCTTGCA GGCCTCCTCG
TTGATCGGCC AGGGCGTGAT GGTGCCGGGC AGCACCGTGC GTGTCGGCGA GACCGAGGAC
GGTGGCGTCG TGGCCACGCC GCTGGGCGCC GAGCTGGCAA CTGGTGCCGA CGAACTCGAG
ATCACCATCA CCAATGGCTC CGGCGAGGTC GTCCATCGCA GTGTCGAGGA GAATGTGCCG
TCTGGCGTGC AGTCCTTCGA TTGGCCGGGC ACGGGGCTGG ATGGCAATGC CGTGGCCGAG
GGCGCCTATA ACGTCGAGAT GACGGCCAGG GTCGGAGGCG AAGAGGTGTC CGTCACGCCG
CTCAACTACG CCTTGGTGCA GGGCGTGACC TCGGGTGACA ACGGGCCGAC CCTGGACCTT
GGCACCTCCG ATAGCGTCGC GCTCGAAGAC GTGCGCCAGA TTCTTTGA
|
|---|
| Protein sequence | MASPVIGSNT LASINSTPNA NASNETRTTG AESSEDLNNR FMTLLITQLQ NQDPTKPMDN
SDMTAQLAQI NTVSGIQELN DSLGDINEQI DAGKTLQASS LIGQGVMVPG STVRVGETED
GGVVATPLGA ELATGADELE ITITNGSGEV VHRSVEENVP SGVQSFDWPG TGLDGNAVAE
GAYNVEMTAR VGGEEVSVTP LNYALVQGVT SGDNGPTLDL GTSDSVALED VRQIL
|
|---|
| |