Gene Csal_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1960 
Symbol 
ID4027200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2217094 
End bp2218464 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content67% 
IMG OID637967156 
Productflagellar hook-length control protein 
Protein accessionYP_574011 
Protein GI92114083 
COG category[N] Cell motility 
COG ID[COG3144] Flagellar hook-length control protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATTG CCCTGCTCAA CACCCTTCAA GGCGGTAACC AAGCCTCCGC CACCACGCCC 
GGCAGCGCGG GAAGTCAGCG CGGCGGCAAG AGCGCCGACG ACAACGCCTC GCCATTTGCC
AGTCTGCTCG GCAAGGCCCG TGGTGCCGGC GATGCCAGTC AAGAAGGCGC TGTACGCGAA
CTGGCCGGGA GCGCCTCCAA GAAGGATGGC AGCGACCTGC TGGCGACGGT GAACGCTCTC
TTGCAAAGCG ACGACGGCGC CAAGCTGCTC GACGAGTGGC TGGCCAGCGG CGACGCGGGC
GAGCTCGACG CACTTGTCGA ACGACTGGCT TCACAGAGCG AAGCGCTCGG TGATGCCCTG
TCGGATAGCG ACGCACTCGA CAATGAGGCG CTTGCCGCCC TGCTCGTCTC GCAGCTCTCC
TCGTCGAGTG CCCAGAACAC GGCCAGTGTC ACCTCCTCTG CCACGCAACA GCCGACCAGC
ACCACTCAGA GTGCGCTGTC ATTGAGCGAC ATCCAGCAAC GCATGCTGCT CATCCAGCAA
GCGGGCCAGG GAGGCAACGG CGATGCCTCA TCCCGTCAGG ACCTCATGGC GCGCCTTGCC
AATGCCGCCT CCGGTGACAG TCAGGCCAGC CAATCCCTGA CCCAGTTGCT GCAAGGCGCC
CAGGGGCAAG CCAACCAGTC GGCCTCTCAG CTGCAGGGCA GCAATCAGCT CACGCCCTCG
GCCGTCTTCG GTGCCAACCT GGTGCAACAG GCGCAGTCCG CCGCCAATGC ACAGCGTGGT
GACCTGCTCG CCACCCAGGG GGGCGATCGG AGCAGCCCCG ACAACGCCTT GCTGACCGGA
CTGGGGAACG CCACCTCGCC TTCCGGTATG ACGGGCAGTG CCGCCAACGC CGCCGGCAAT
GCGGCAAGCG CCACCCCGAC CGCCACCTTG ACGCCACAGG TCGGCATGAA CGAATGGGGA
CAAGCGCTGG GTCAGCAGGT CGTGCGCATG GCACAACGCG GCGACCAGCA GGTCGAGTTG
CGCCTCCATC CGGCCGAACT CGGACCGATG AGCGTCTCGC TCAAGATGGG CGACCAGCAG
CAGGCGAATC TCCAGTTCTT CTCTGCCCAC GGGGCCGTGC GTCATGCCCT GGAAGCGGCC
ATCCCGCAAT TGCGCGAGGC CCTGGCCGAC AGCGGCATCG CCCTGGGTGA AACCTCGGTC
GGCGAGCAGG ACCAGTTTCA GCAGCAGTCC GATGGACAGC CGGGCCAGCC CTCACGCGAG
GGCACGCCCG GCCAGGCACT GGCAGGCAGT GACACCGGCG CCGAGATGCC CAGCCTGACC
GAGACATCGC TGCATTACGT CACGTCGTCG GGCATCAACC TTTATGCCTG A
 
Protein sequence
MDIALLNTLQ GGNQASATTP GSAGSQRGGK SADDNASPFA SLLGKARGAG DASQEGAVRE 
LAGSASKKDG SDLLATVNAL LQSDDGAKLL DEWLASGDAG ELDALVERLA SQSEALGDAL
SDSDALDNEA LAALLVSQLS SSSAQNTASV TSSATQQPTS TTQSALSLSD IQQRMLLIQQ
AGQGGNGDAS SRQDLMARLA NAASGDSQAS QSLTQLLQGA QGQANQSASQ LQGSNQLTPS
AVFGANLVQQ AQSAANAQRG DLLATQGGDR SSPDNALLTG LGNATSPSGM TGSAANAAGN
AASATPTATL TPQVGMNEWG QALGQQVVRM AQRGDQQVEL RLHPAELGPM SVSLKMGDQQ
QANLQFFSAH GAVRHALEAA IPQLREALAD SGIALGETSV GEQDQFQQQS DGQPGQPSRE
GTPGQALAGS DTGAEMPSLT ETSLHYVTSS GINLYA