Gene Csal_1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1953 
Symbol 
ID4027193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2209830 
End bp2210930 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content69% 
IMG OID637967149 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_574004 
Protein GI92114076 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID[TIGR03169] pyridine nucleotide-disulfide oxidoreductase family protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACGC GCCTCGTACT GGTAGGTGCC GGCCACGCGC ACCTGCATTT GCTGCAACAC 
GCCGACACGC TTCGTCGTGC CGGCTATCGC ATCACACTCG TCGCCCCCAG CCGCTTCTGG
TATTCCGGCA TGGCCGCGCG GCTGTTGAGC GGCGCGCCAC GCACAGAGTG CAGCCTGGAT
ATCGCCTCGC TCAGCGTGCG TCACGCCGTC GAACACGTCA CCGCCCCCTT CGCTGCCCTG
GAGGTGGACT CCCGCCATGT CCTGCTGGCC GACGGCAACA ACCTGGCATT CGACGTACTG
TCGCTGAATG TCGGCAGCGA CGTCATGCCG CCCACCGCGG GCGGCGCCAC GGTCGCGGCC
TGGGGGGCGG CCCGCTATTG GCACGTCAAG CCCATCGAGC GCCTCGATGC CTTGCGCCAG
CACGTGCACG ACGCGGCACA ACGCCACCAG TCGCTGCACA TGGTCGTGGT CGGCGGCGGC
CCCTCGGGCG TGGAAATGGC CGCCAATCTG GCGGGACTGA GCCGCCGCCT GGGCGTGCCC
AACGACGTTC GCCTGGTCAC ACGCCACGCG CGCTTGCTGC CCGCCGCCCC GGAGGCCGCT
GCCCGATGGG CCAGCCGCCA GCTCGCTCGG CTGGGCGTCG AGTGGCGGGG CAATCTGGCA
CTGGATGCCG GCGCGGCATG GCTCGACGCC TTGCCCGCCG CCGCGGATGA CATCGTCCTC
GCCACGGGGC TGCGGCCTGC ATACTGCGTC GCCGACCTGC CGCTGGATCT GGACGACAAC
GGCATTCGCA TCCGAACGAC CCTGCAAAGC GAGAGCCATG ACGAGATTTT CGCCGTCGGC
GATTGCGCCT CGCTGATCGA GCACGCCTTG CCCAAGCGCG GTGTCGAGGG CGTGCGACAA
GGTCCCGTGC TGCTGGATAA CCTGGTCGCG CTGCAACGCG GGAAGCCCCT GCGCGATTAC
CGTCCGCCCG GGACCGCGCT GTCGATCGTG GATCTCCACG ATACGGGACT CGCGCTATAC
GGCACGCACT GGTGGGGAGG TCGGGGAGCC CTGCGGCTCA AGCGATACAT CGACACGCGC
TTCTTGAAGC GCTACCGATG A
 
Protein sequence
MTTRLVLVGA GHAHLHLLQH ADTLRRAGYR ITLVAPSRFW YSGMAARLLS GAPRTECSLD 
IASLSVRHAV EHVTAPFAAL EVDSRHVLLA DGNNLAFDVL SLNVGSDVMP PTAGGATVAA
WGAARYWHVK PIERLDALRQ HVHDAAQRHQ SLHMVVVGGG PSGVEMAANL AGLSRRLGVP
NDVRLVTRHA RLLPAAPEAA ARWASRQLAR LGVEWRGNLA LDAGAAWLDA LPAAADDIVL
ATGLRPAYCV ADLPLDLDDN GIRIRTTLQS ESHDEIFAVG DCASLIEHAL PKRGVEGVRQ
GPVLLDNLVA LQRGKPLRDY RPPGTALSIV DLHDTGLALY GTHWWGGRGA LRLKRYIDTR
FLKRYR