| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1950 |
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| Symbol | |
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| ID | 4027190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | - |
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| Start bp | 2207203 |
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| End bp | 2207901 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637967146 |
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| Product | ribosomal small subunit pseudouridine synthase A |
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| Protein accession | YP_574001 |
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| Protein GI | 92114073 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.588471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTCTCG ACCGTTTTTT AAGTGAAAGT ACCGAGCTGA CACGCTCACT GGCCAAGAAA
GCCCTGCATC GAGGCGAGGT CGAGGTGAAT GGCGATGTCG TCAAGAACGC CGCCTTCAAG
CTGGGCGACG AACATGTCGT GCGCTGGCTG GGCGAACCCC TGGCGCGCAT CGGCGTGCGC
TACTTGATGC TCAACAAGCC CGCCGGGTAT GAGTGCACCA CGCGACCGGG ACGCTATCCG
TCGGTGATCG AGCTGCTGGA CGTGGCCAAG CGCGGGCGAT TGCACATCGC CGGGCGTCTG
GACGTCGACA CCACCGGGCT CGTGCTGATC ACCGAGGATG GTCAATGGTC GCACCGACTG
ACGTCACCCC GGCGGCGCTG CGACAAGCAC TATCTCGTGA CGCTGGCGCG GCCGCTGGCG
GAGGGCGCCG AGACGGCGCT GGCGGAGGGA TTGATGCTGG AAGGCGAGGA CAAGCCGACC
CTGCCGGCTC GGCTCGAGCG ATTGGACGAC GCCGACGGCG TGCGCGTCAG GCTGGTGATT
CAGGAAGGGC GCTTCCACCA GATCAAGCGC ATGTTCGCGG CGCTCGACAA CGAGGTCGTG
GCCCTGCACC GCGAGCGTAT CGGCGAGATC GCCCTCGATC CCGCGCTGGC GGCTGGCGAG
TGGCGGGAAC TCACTCAGGC GGAAATCGAT ACCGTCTGA
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| Protein sequence | MRLDRFLSES TELTRSLAKK ALHRGEVEVN GDVVKNAAFK LGDEHVVRWL GEPLARIGVR
YLMLNKPAGY ECTTRPGRYP SVIELLDVAK RGRLHIAGRL DVDTTGLVLI TEDGQWSHRL
TSPRRRCDKH YLVTLARPLA EGAETALAEG LMLEGEDKPT LPARLERLDD ADGVRVRLVI
QEGRFHQIKR MFAALDNEVV ALHRERIGEI ALDPALAAGE WRELTQAEID TV
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