Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1945 |
Symbol | |
ID | 4027185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 2200030 |
End bp | 2201367 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637967141 |
Product | lytic transglycosylase |
Protein accession | YP_573996 |
Protein GI | 92114068 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.106918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTAC GATCGAGTCG CCGCCAGGCG CTACGTTTGG GTCACGTAGC CCTGGCGGGA GGACTGTTAT TGAGCGCATT GTCGCTTCCC GCCGCGAAGG CCGCCTCCGG CGAGGCCACC GGCACCTCGG CAGCCACGAC TACCTTCTGG CAAGCCCTGG TATTGCAGCG CGCCCCGCAG GCCGATGCCT GGACGCGCCT CAAGCAGGGC TTCGGCCTGC CGCACGATAT TCAGCATCCG CGTGTCGCGA AATGGCTCGA CTGGTATGCC GCGCACCCCG AGCACGTCGA GCAGGTCGCC GCCAAGGCGC GCCCCTGGCT GCGCTGGGTG ACGCGTCAGC TCGAGGCTCG CGACATGCCC ACCGAAATCG CCCTGCTGCC TTTCATCGAA AGCGCCTACG ACCCCACGGC CCGCCACCCC GGCGGTGCTT CCGGGCTCTG GCAGTTCATG CCCGGCACCG GCGAAGCCAT GGGGCTCGCC GAGACCTGGT GGTACGACGG GCGCCGCGAT GTCGTCTCTT CGACGAATGC GGCCCTCGAC TACCTGCAGA CGCTCGCCGA CCAGTGGTAC GAAGGCAACA TGGAACTCGC CCTCGCCGCC TACAATGCCG GCGCCGGCAC CGTCAATCGC GCGCGTGAGC GAGCCGCCGC GCAGGGCAAG CCCATCGACT ACTGGCACCT CTCGCTGCCC GCCCAGACCA TGGACTACGT GCCCAAGCTT CTCGCCTTGT CGGCGGTCAT CTCGGACCCC CAGCGGTACG CCATCGACCT GCCGAGCATT CCCGATCGAC CGGCCATCGC CAGGGTCACC GCCGAGGGGC AACTGTCGCT GGCCGACGCC GCCCAGCTCG CCGATGTCAG CGAAGCGCGG CTGCAAGCCC TCAACCCCGG CCTGCGGCGT GGTGCCACGC GCCCCGACAG GAACGCGCAA TTGATCGTGC CCGCCGATCG CCGGCAGCGT TTTCTCGCCA ATCTCGATAC GCTGCCCGCC GAAAAACGGC GTACCCGGAC GCACTACGTG GTCCAGTCCG GCGACACGCT GTCCGGCATT GCCGCGCGCC ATGACATCCC GGTGGGCGTA CTGCGTCGGC AGAATGGGAT CAGCGGCAAT ATGCTGCGCG TCGGTCAATC CCTGGTCATT CCGGGCGCGT CGAGCCGTGC ACGCCTGGCC AGCCGTGAGG CCACCCAGCA AGTCCGCGTC AAGCCGGGTG ACAGCCTCTC GCGTATCGCG GCACGCCATG ATGTCAGCGT CGACGACCTG ACACGCTGGA ATCAGATACA GCGCGACGAT TATCTCCAGC CCGGACAGCG TCTCACGCTT CGCACCCCGG CGCGTTGA
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Protein sequence | MKVRSSRRQA LRLGHVALAG GLLLSALSLP AAKAASGEAT GTSAATTTFW QALVLQRAPQ ADAWTRLKQG FGLPHDIQHP RVAKWLDWYA AHPEHVEQVA AKARPWLRWV TRQLEARDMP TEIALLPFIE SAYDPTARHP GGASGLWQFM PGTGEAMGLA ETWWYDGRRD VVSSTNAALD YLQTLADQWY EGNMELALAA YNAGAGTVNR ARERAAAQGK PIDYWHLSLP AQTMDYVPKL LALSAVISDP QRYAIDLPSI PDRPAIARVT AEGQLSLADA AQLADVSEAR LQALNPGLRR GATRPDRNAQ LIVPADRRQR FLANLDTLPA EKRRTRTHYV VQSGDTLSGI AARHDIPVGV LRRQNGISGN MLRVGQSLVI PGASSRARLA SREATQQVRV KPGDSLSRIA ARHDVSVDDL TRWNQIQRDD YLQPGQRLTL RTPAR
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