Gene Csal_1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1940 
Symbol 
ID4025875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2196257 
End bp2197045 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content67% 
IMG OID637967136 
ProductNUDIX hydrolase 
Protein accessionYP_573991 
Protein GI92114063 
COG category[L] Replication, recombination and repair 
COG ID[COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.438286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATGT TGTCATCGCC GTTCGTCCGG GAATTGCCCG GTGCGCAGAC ACCGCGCCGG 
GGCTATTGGA TTCGTTTCGG CGAATCCGGT ATCGCCCCGG GCGAGGATGG CATTCTCCAG
CCGCCGGGCG AGTGGCCGGC GCATGCCATG GCGTTGGGCA TGTGGCATGA CCTGCCGGTC
GCCATGGTGC ATGAGCCGGG CGATGCCGAC TGGCCCCCGG CACGCGAGTG GCTGGCGAGA
TTGCCCGGCC CGCAGGCCGA TCTGCTGGCC ACGGCCCTGC AGGTCGATGC CTGGGCACGC
GATCATCGCT TCTGCGGACG CTGCGGTTCG CCGATGACCC GGCTCGCCCA TGAGTTCGCC
ATGCAGTGCG AGGCATGCGG CCATCGCAGT TATCCGCGTA TCTCGCCGTG CATCATCACT
CTGGTCACGC ATGGGCAGGA CTTGCTGCTG GCGCGGAATT CGCGCTTTCC CGCGCGGCGT
TATTCCACCC TGGCGGGGTT CATCGAGCCG GGCGAGAGCG CCGAAAACGC CGTACGCCGT
GAAGTCTACG AGGAGGTGGG CATCGAGATC GGGCGCGTGC GTTTCTTCCG CAGCCAGTCC
TGGCCGTTTC CGCACTCGTT GATGCTGGGC TTCTTCGCCG AAGCCGCGAG TCGGCGGATC
CGGATCGACG GAGTGGAGAT CGCCGATGCC GCCTGGTTCA CACCACGGCA TCTGCCCGAG
TTGCCGCCGC GACATTCGAT CTCGCGCCAG TTGATCGAAA CGCATCTCAG CGCGGTGTCG
CCGCGCTGA
 
Protein sequence
MTMLSSPFVR ELPGAQTPRR GYWIRFGESG IAPGEDGILQ PPGEWPAHAM ALGMWHDLPV 
AMVHEPGDAD WPPAREWLAR LPGPQADLLA TALQVDAWAR DHRFCGRCGS PMTRLAHEFA
MQCEACGHRS YPRISPCIIT LVTHGQDLLL ARNSRFPARR YSTLAGFIEP GESAENAVRR
EVYEEVGIEI GRVRFFRSQS WPFPHSLMLG FFAEAASRRI RIDGVEIADA AWFTPRHLPE
LPPRHSISRQ LIETHLSAVS PR